Salimicrobium jeotgali: AAV35_000025
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Entry
AAV35_000025 CDS
T04359
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
sje
Salimicrobium jeotgali
Pathway
sje03030
DNA replication
sje03430
Mismatch repair
sje03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAV35_000025
03430 Mismatch repair
AAV35_000025
03440 Homologous recombination
AAV35_000025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sje03032
]
AAV35_000025
03400 DNA repair and recombination proteins [BR:
sje03400
]
AAV35_000025
Enzymes [BR:
sje01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAV35_000025
DNA replication proteins [BR:
sje03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AAV35_000025
DNA repair and recombination proteins [BR:
sje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AAV35_000025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AKG03322
UniProt:
K2GAU4
LinkDB
All DBs
Position
complement(3833..4972)
Genome browser
AA seq
379 aa
AA seq
DB search
MKFAIQRDQLMESVQDVMKAISSRTAIPILTGMKLEATTEGVKLTGSDSDISIESFIPAE
EDGTVHIENIEPGSIVLQAKYFPDIVRKVPDNTVEIESDHTKNVTIRSGSAEFHLNGQDA
EEYPSLPQLRTENSFDMPTDLLKRLIKQTGFAVSTSETRPILTGVHVSTEEENLQFVATD
SHRLASRKISLETEERLNLPSVVIPGKSLSELNKILDDTGDSVQISITDNQILFRTKHLY
FLSRLLEGNYPETSRLIPNESKTTVLIDSKELLQSVDRASLLAKENRNNVVRLLTKENNQ
IEIHGNSPEVGNVTEEVTADTIDGEELKISFSAKYMMDALRAIDATQVKISFTGAMRPFL
ITPVDDDSILQLILPVRTY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgctattcagcgtgatcaactgatggaaagtgtccaggatgtaatgaaagcc
atatcttcccgtacggcaattccgattcttacaggaatgaaactggaagctacgacagaa
ggagtaaaacttacggggagtgactccgacatctccatcgaatctttcatacccgccgag
gaagacggaacggtccatatcgaaaacattgaaccgggaagcatcgttctacaggcaaag
tactttcctgatatcgtacgtaaagttccggataataccgtggaaatagaaagcgatcat
acgaagaacgtaacgatccgttccggaagtgcagaatttcacctgaatggccaggacgcc
gaagaatatccgtctcttccgcaactgcgtacggaaaacagtttcgatatgcctacggat
cttctgaaaagattaatcaaacagaccggattcgccgtttccacttccgagacccgaccg
attctgacaggagtgcacgtgagtacggaagaagagaatcttcagttcgtagcaaccgac
agccaccgtctcgcttcaaggaaaatcagcctggaaacggaagaaaggttgaaccttcct
tccgtcgtcatccccgggaagagtctcagtgaactgaacaaaattctcgatgatacggga
gactcggtacagataagcattacggataaccagatcctcttccggacaaaacatttatac
ttcctgtcacgtcttctcgaaggtaactatccggagacatcccgtcttattccgaacgaa
agcaaaacgacggtacttatcgattccaaagaactgcttcagtccgtggaccgtgcttct
ttactggctaaagaaaacagaaacaacgtcgtacgtctgcttacgaaagaaaacaaccag
attgaaattcacggaaattctccggaagtcggtaacgtaacggaagaagtgacggctgac
acaatcgacggcgaagaactgaaaatatcgttcagcgccaaatacatgatggatgccctg
agggcgatcgatgcaactcaggtgaaaatatcttttacaggagcgatgcggccgttcctg
atcactcctgtagacgatgattccatacttcagctcatcctgccggtccgtacgtattaa
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