Streptococcus pneumoniae JJA (serotype 14): SPJ_1972
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Entry
SPJ_1972 CDS
T00873
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sjj
Streptococcus pneumoniae JJA (serotype 14)
Brite
KEGG Orthology (KO) [BR:
sjj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjj03019
]
SPJ_1972
Messenger RNA biogenesis [BR:
sjj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPJ_1972
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ACO18600
UniProt:
C1CGR0
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All DBs
Position
complement(1845592..1846533)
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AA seq
313 aa
AA seq
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MKISHMKKDELFEGFYLIKSADLRQTRAGKNYLAFTFQDDSGEIDGKLWDAQPHNIEAFT
AGKVVHMKGRREVYNNTPQVNQITLRLPQAGEPNDPADFKVKSPVDVKEIRDYMSQMIFK
IENPVWQRIVRNLYTKYDKEFYSYPAAKTNHHAFETGLAYHTATMVRLADAISEVYPQLN
KSLLYAGIMLHDLAKVIELTGPDQTEYTVRGNLLGHIALIDSEITKTVMELGIDDTKEEV
VLLRHVILSHHGLLEYGSPVRPRIMEAEIIHMIDNLDASMMMMSTALALVDKGEMSNKIF
AMDNRSFYKPDLD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagattagtcacatgaaaaaagatgagttatttgaaggcttttacctaatcaaatca
gctgacctgaggcaaactcgagctgggaaaaactacctagcctttaccttccaagatgat
agtggcgagattgatgggaagctctgggatgcccaacctcataacattgaggcctttacc
gcaggtaaggttgtccacatgaaaggacgccgagaagtttataacaatacccctcaagtc
aatcaaattactctccgcctgcctcaagctggtgaacccaatgacccagctgatttcaag
gtcaagtcaccagttgatgtcaaggaaattcgtgactacatgtcgcaaatgattttcaaa
attgaaaatcctgtctggcaacggattgtccgaaatctctacaccaagtatgataaggaa
ttctactcctatccagctgccaagaccaaccaccatgcctttgaaacgggcttggcttat
catacggcgaccatggtacgtttggcagacgctattagcgaagtttatcctcagctcaat
aagagcttactctatgcggggattatgctgcatgacttagctaaggttatcgagttgacg
gggccagaccagacagagtacacagtgcgaggtaatcttcttggacatatcgctctcatt
gatagcgaaattaccaagacagttatggaactcggcatcgatgataccaaggaagaagtc
gttttgcttcgtcatgtcatcctcagtcaccacggcttgcttgaatatggaagtccagtc
cgtccacgtattatggaggcagagattatccatatgattgacaatctggatgcaagcatg
atgatgatgtcaacagctctggctttggtggataaaggagagatgtccaataaaatcttc
gctatggataatcgttccttctataaaccagatttagattga
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