Sphingobium indicum UT26S: SJA_C1-10660
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Entry
SJA_C1-10660 CDS
T01201
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjp03016
]
SJA_C1-10660 (rph)
Enzymes [BR:
sjp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
SJA_C1-10660 (rph)
Transfer RNA biogenesis [BR:
sjp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SJA_C1-10660 (rph)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
BAI95900
NITE:
SJA_C1-10660
UniProt:
D4YZW8
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All DBs
Position
1:complement(1072282..1072998)
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AA seq
238 aa
AA seq
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MRPSGRAPDQMRDITMEPGFTIHAEGSCLVSFGDTRVLCTASIEEKVPPFLRGKGSGWVT
AEYGMLPRATHTRGSREAAKGKQSGRTQEIQRLIGRSLRAVVDLQKLGERQIVVDCDVIQ
ADGGTRTAAISGSWVALRIAIDGLLASGALAEDPIVQKVAAISCGIYNGTPVLDLDYAED
SNAEADANLILTGDGKFAEVQATAEGATYDEEELLRLLRLARIGCAQIFAAQDKATGR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccttccggccgcgcgcccgaccagatgcgcgacatcaccatggaacccggcttc
accatccatgccgagggcagttgcctggtcagcttcggcgacacgcgcgtgctgtgcacc
gcctccatcgaggaaaaggtgccgcccttcctgcgcggcaagggatcgggctgggtcacg
gcggaatatggcatgctgccccgcgccacccacacccgcggcagccgggaggccgcgaag
ggcaagcagtcgggccgcacccaggaaatccagcgcctgatcggccgctcgctgcgcgcc
gtggtcgacctccagaaactgggcgagcggcagatcgtcgtcgactgcgacgtgatccag
gccgatggcggcacccgcacggccgccatttcgggaagctgggtggcgctgcgcatcgcc
atcgacgggctgctggcgtctggcgcgttggccgaagaccccatcgtgcagaaggtcgcg
gcgataagctgcggcatctataacggcacgccggtgctggacctcgactatgccgaggac
agcaatgccgaggcggacgccaatctgatcctgacgggcgacggcaagttcgcggaggtg
caggcgaccgccgagggcgcgacctatgacgaggaggaactgctgcgcctgctgcgcctc
gcccgcatcggctgcgcgcagattttcgcggcgcaggacaaggcgaccgggagataa
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