Sphingobium indicum UT26S: SJA_C1-15280
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Entry
SJA_C1-15280 CDS
T01201
Name
(GenBank) pseudouridylate synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sjp03009
]
SJA_C1-15280
03016 Transfer RNA biogenesis [BR:
sjp03016
]
SJA_C1-15280
Enzymes [BR:
sjp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
SJA_C1-15280
5.4.99.29 23S rRNA pseudouridine746 synthase
SJA_C1-15280
Ribosome biogenesis [BR:
sjp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SJA_C1-15280
Transfer RNA biogenesis [BR:
sjp03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
SJA_C1-15280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BAI96362
NITE:
SJA_C1-15280
UniProt:
D4Z180
LinkDB
All DBs
Position
1:complement(1527307..1527984)
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AA seq
225 aa
AA seq
DB search
MSLLHDRVLFIDGEAIILDKPAGLPVDAPRDGSLSLENHLSSLTFGFQRWPLPVHRLDRD
TSGCLLLARNPKAHKRFAAAFEAGTVAKRYVAVVDGVPAEDSGAIDLSLKKVSTPAQGWR
MIPAKAGKAAFTEWRKIAEKDGRALIVFTPRTGRTHQIRTHALHGLGFGIAGDPVYGSGQ
GPMLLHSRFLSIPRGEKPPAEATAPLPATFAAAGFGQELLEQARL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
ttgtccctgcttcatgaccgagttctgttcatcgatggcgaggccatcatcctcgacaag
ccggcgggcctgcccgtcgacgcgccgcgtgacgggtcgctttcgctggaaaaccacctg
tcctcgctgaccttcggcttccagcgctggccgctgccggttcaccggctggaccgcgac
accagcggctgcctgctgctcgcccgcaatcccaaggcgcacaagcgcttcgccgccgcc
ttcgaggcggggacggtcgcgaagcgctatgtcgcggtggtggacggcgtcccggcggag
gacagcggcgccatcgacctgtcgctcaagaaggtcagcacgcctgcccagggctggcgg
atgatcccggcgaaggcaggcaaggccgcgttcaccgaatggcgcaagatcgcggaaaag
gatggacgggcgctgatcgtcttcaccccccgcaccggacgcacccaccagatccggacc
catgcgctgcatggcctgggcttcggcattgcgggcgatccggtctatggatcgggccag
gggccgatgctgctgcacagccgcttcctcagcattccccgcggggaaaagccgccggcg
gaggcgaccgcccccctgcccgcgacctttgcggcggcgggcttcgggcaggaactgctc
gaacaggcccggctttag
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integrated database retrieval system