KEGG   Sphingobium indicum UT26S: SJA_C1-15280
Entry
SJA_C1-15280      CDS       T01201                                 
Name
(GenBank) pseudouridylate synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
sjp  Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:sjp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sjp03009]
    SJA_C1-15280
   03016 Transfer RNA biogenesis [BR:sjp03016]
    SJA_C1-15280
Enzymes [BR:sjp01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     SJA_C1-15280
    5.4.99.29  23S rRNA pseudouridine746 synthase
     SJA_C1-15280
Ribosome biogenesis [BR:sjp03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SJA_C1-15280
Transfer RNA biogenesis [BR:sjp03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    SJA_C1-15280
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: BAI96362
NITE: SJA_C1-15280
UniProt: D4Z180
LinkDB
Position
1:complement(1527307..1527984)
AA seq 225 aa
MSLLHDRVLFIDGEAIILDKPAGLPVDAPRDGSLSLENHLSSLTFGFQRWPLPVHRLDRD
TSGCLLLARNPKAHKRFAAAFEAGTVAKRYVAVVDGVPAEDSGAIDLSLKKVSTPAQGWR
MIPAKAGKAAFTEWRKIAEKDGRALIVFTPRTGRTHQIRTHALHGLGFGIAGDPVYGSGQ
GPMLLHSRFLSIPRGEKPPAEATAPLPATFAAAGFGQELLEQARL
NT seq 678 nt   +upstreamnt  +downstreamnt
ttgtccctgcttcatgaccgagttctgttcatcgatggcgaggccatcatcctcgacaag
ccggcgggcctgcccgtcgacgcgccgcgtgacgggtcgctttcgctggaaaaccacctg
tcctcgctgaccttcggcttccagcgctggccgctgccggttcaccggctggaccgcgac
accagcggctgcctgctgctcgcccgcaatcccaaggcgcacaagcgcttcgccgccgcc
ttcgaggcggggacggtcgcgaagcgctatgtcgcggtggtggacggcgtcccggcggag
gacagcggcgccatcgacctgtcgctcaagaaggtcagcacgcctgcccagggctggcgg
atgatcccggcgaaggcaggcaaggccgcgttcaccgaatggcgcaagatcgcggaaaag
gatggacgggcgctgatcgtcttcaccccccgcaccggacgcacccaccagatccggacc
catgcgctgcatggcctgggcttcggcattgcgggcgatccggtctatggatcgggccag
gggccgatgctgctgcacagccgcttcctcagcattccccgcggggaaaagccgccggcg
gaggcgaccgcccccctgcccgcgacctttgcggcggcgggcttcgggcaggaactgctc
gaacaggcccggctttag

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