Sanguibacter keddieii: Sked_16040
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Entry
Sked_16040 CDS
T01214
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ske
Sanguibacter keddieii
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ske03032
]
Sked_16040
03400 DNA repair and recombination proteins [BR:
ske03400
]
Sked_16040
Enzymes [BR:
ske01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Sked_16040
DNA replication proteins [BR:
ske03032
]
Prokaryotic type
DNA Topoisomerases
Sked_16040
DNA repair and recombination proteins [BR:
ske03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sked_16040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
ACZ21539
UniProt:
D1BG28
LinkDB
All DBs
Position
complement(1795738..1798212)
Genome browser
AA seq
824 aa
AA seq
DB search
MARQTRSGSTTDLGDFTEKIVDIDVAQEMEGSFLEYAYSVIYARALPDARDGLKPVQRRI
LFQMSDMGLRPDRGHVKSARVVGEVMGKLHPHGDTAIYDALVRMAQPFSLRLPMVDGHGN
FGSLDDGPAAPRYTEARLAPAALVMTTGLDEDVVDFVPNYDNKLVQPEVLPAAIPNLLVN
GASGIAVGMATNLAPHNLIEVVAAARFLVANPKASLEDLMRFVPGPDLPTGGKIVGLEGI
RDAYRTGRGSFKTRATVRVENVTPKRKGLVVTELPYLVGPEKVIEKIKEGVQAKKLAGIT
AVTDLTDRSHGLRLVIEIKTGFNPEAVLEQLYRYTPMEDSFGMNNVALVDGQPRTLGLRE
MLSVWVDHRIDVVRRRSQFRLTKRLDRLHLVEGLLLAIVDIDEVIQVIRSSDDADTARGR
LREVFDLSEAQSEYILELRLRRLTKFSRIELEKEQSALVEEIEQLRAILGDDALLRRVVS
DEMAEVAKVYGTPRRTILLDSAGGGVTGLPGPSSPRGAPVSLEIEDTPCWVLLSSTGLLA
RTSDETEPVRDDHRHAHDVLASGVLASVRAEVGALTSAGRVVRLSVLDLPALPPTQGAPS
LSGGVPVAEVCALEPGERLVTVVSLAEDAPTLALGTAAGVVKRVAQGDVPNRDSWEVVAL
KPGDAVVGAVPVTDDDELVFVSSEASLLHFPATAVRPQGRTAGGMAGIKLAGDQRVVFFG
AVRAGQSEECAVVTVAGASDALPGTQTGSVKTTAFAAYPGKGRATGGVRAHRFLKGEDTL
LLAWVGTAPPHATGAAGQPLELPEADPRRDGSGTMLDAPVHAVG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcagacgcgatccggctcgacgaccgacctcggcgacttcaccgagaagatc
gtcgacatcgacgtcgcccaggagatggagggctcgttcctcgagtacgcctactccgtc
atctacgcgcgcgccctccccgacgcccgcgacgggctcaagccggtgcagcgacgcatc
ctcttccagatgtccgacatggggctgcgtccggaccgcggccacgtgaagtcggcacgc
gtcgtcggcgaggtgatgggcaagctccacccgcacggtgacacggcgatctacgacgcg
ctcgtccgcatggcgcagcccttctcgctgcgcctgccgatggtggacgggcacggcaac
ttcggctcgctcgacgacggcccggcggcgccccggtacaccgaggcacgcctcgccccg
gccgcgctggtgatgacgaccggtctcgacgaggacgtcgtcgacttcgtgccgaactac
gacaacaagctggtccagcccgaggtgctgcccgcggcgatcccgaacctgctggtcaac
ggcgcgtcgggcatcgcggtggggatggcgacgaacctcgccccgcacaacctcatcgag
gtggtcgcggcggcacggttcctcgtggcgaacccgaaggcgagcctggaagacctcatg
cggttcgtgccggggccggacctgcccacgggcgggaagatcgtcgggctcgagggcatc
cgcgacgcgtaccgcacgggccgtgggtcgttcaagacccgggcgaccgtgcgggtcgag
aacgtcacccccaagcgcaaggggctcgtcgtcaccgagctcccgtacctggtcggcccg
gagaaggtcatcgagaagatcaaggagggtgtccaggcgaagaagctcgccggcatcacc
gcggtcaccgacctcaccgaccggtcgcacggtctgcgcctggtcatcgagatcaagacg
gggttcaaccctgaggccgtgctcgagcagctctaccggtacacgccgatggaggactcc
ttcggcatgaacaacgtcgcgctcgtcgacggtcagccgcgcaccctcgggctgcgcgag
atgctctccgtgtgggtcgaccaccgcatcgacgtggtgcgccgccgctcgcagttccgc
ctcaccaagcgcctcgaccgtctgcacctcgtcgagggcctgctgctggcgatcgtcgac
atcgacgaggtcatccaggtgatccgcagctcggacgacgcggacaccgcgcgcggtcgc
ctgcgcgaggtgttcgacctgtccgaggcgcagtccgagtacatcctcgagctgcggctg
cgacggctcaccaagttctcgcgcatcgagctcgagaaggagcagtcggcgctcgtcgag
gagatcgagcagctccgcgcgatcctcggcgacgacgcgctcctgcgccgcgtggtgagc
gacgagatggccgaggtggccaaggtctacggcacgccgcgccgcaccatcctgctcgac
tcggccggtggcggcgtgaccggcctgcccgggccctcgagcccgcgcggcgcccccgtc
tcgctcgagatcgaggacaccccgtgctgggtgctgctgtcgtcgaccgggctgctcgcc
cgcacgagcgacgagaccgagcccgtgcgcgacgaccaccgccacgcgcacgacgtcctc
gcgtcgggcgtgctcgcgtccgtacgcgccgaggtcggtgcgctgacgtccgccggacgg
gtggtgcgcctctcggtgctcgacctgccggcgctgcctcccacgcagggcgcgccgagc
ctgtccggaggcgtgcccgtcgccgaggtgtgcgccctcgagccgggcgagcggctcgtc
accgtcgtctccctcgccgaggacgcgccgaccctcgcgctcggcacggccgccggcgtg
gtcaagcgcgtcgcccagggtgacgtcccgaaccgcgacagctgggaggtcgtcgccctc
aagccgggcgacgccgtggtcggcgcggtcccggtgaccgacgacgacgagctcgtgttc
gtcagctccgaggccagcctgctgcacttcccggccaccgcggtgcggccgcaggggcgg
accgcgggcggcatggccggcatcaagctcgcgggcgaccagcgggtcgtgttcttcggt
gcggtccgcgcggggcagtccgaggagtgcgccgtggtcaccgtggcgggcgcctccgac
gccctgcccggcacccagacggggagcgtcaagacgacggccttcgccgcctaccccggc
aaggggcgggcgaccggcggcgtccgggcccaccggttcctcaagggcgaggacacgctg
ctcctcgcctgggtcggcaccgctcccccgcacgccacgggagcagcagggcagccgctc
gagctccccgaggcggacccgcggcgcgacggctcgggcaccatgctcgacgcgccggtg
cacgcggtcgggtag
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