Shewanella khirikhana: STH12_00637
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Entry
STH12_00637 CDS
T06711
Symbol
bdcR
Name
(GenBank) HTH-type transcriptional repressor BdcR
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skh03000
]
STH12_00637 (bdcR)
Transcription factors [BR:
skh03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
STH12_00637 (bdcR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
AZQ09776
UniProt:
A0A3Q9E5Q3
LinkDB
All DBs
Position
734314..734886
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AA seq
190 aa
AA seq
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MARSCNFCKEEKLEQAMNLFWQKGYEGTSVADLVEHLGINRFSLYNSFGDKLTLYRDALR
RYLYTRGLTGLEALEADDADMDALLNLVEEFAAKQKDQQFGCFMQNALLERCVEDDEVRR
LGNELFEGLEQAFCKVIARYQTQARAAELAAFLVMQLQGIRVLGKSGQFALLDAAMVVLR
GEIQRWKTPA
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaagctgtaatttttgcaaagaggaaaagctggagcaggccatgaacctgttt
tggcaaaagggctacgagggcacctcggtggccgatttggtcgagcacctggggatcaat
cgcttcagcctgtacaacagctttggcgataagctgactctgtaccgtgacgcgctcagg
cgttatctgtacacccgtggcctgaccgggctcgaagcactggaagccgacgacgccgat
atggacgcgctgctaaatttggtggaagagtttgccgccaagcaaaaagatcagcagttt
ggctgctttatgcaaaacgcgctcttggagcgctgcgtggaagatgacgaagtcaggcgt
cttggcaatgagctgtttgaagggctggagcaggcattttgcaaggtgattgcacgctat
cagacccaagcgcgtgccgccgagctggcggcctttttggtgatgcagctgcagggcatt
cgggtgcttggcaagtcagggcagtttgcgctgctcgatgctgccatggtggtgctcaga
ggcgaaatccaacgctggaaaacgcctgcctga
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