Shewanella khirikhana: STH12_00698
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Entry
STH12_00698 CDS
T06711
Gene name
ispU
Definition
(GenBank) Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific)
KO
K00806
undecaprenyl diphosphate synthase [EC:
2.5.1.31
]
Organism
skh
Shewanella khirikhana
Pathway
skh00550
Peptidoglycan biosynthesis
skh00900
Terpenoid backbone biosynthesis
skh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
STH12_00698 (ispU)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
STH12_00698 (ispU)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
skh01006
]
STH12_00698 (ispU)
Enzymes [BR:
skh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.31 ditrans,polycis-undecaprenyl-diphosphate synthase [(2E,6E)-farnesyl-diphosphate specific]
STH12_00698 (ispU)
Prenyltransferases [BR:
skh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
STH12_00698 (ispU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prenyltransf
AP_endonuc_2
DUF4618
Motif
Other DBs
NCBI-ProteinID:
AZQ09837
UniProt:
A0A3Q9E5U2
LinkDB
All DBs
Position
805870..806670
Genome map
AA seq
266 aa
AA seq
DB search
MSSNREITAEPTTESMPQEVSELVNQSLPRHVAIIMDGNGRWAQAQGKPRVMGHKAGVKA
VRRAVSTARQLGIKSLTLFAFSSENWRRPDTEVSLLMELFFTVLRRELKLLDQNGVRLNI
IGDTSRFSERLQKQIRDAEAKTANNTELVLNVAANYGGRWDILQAANQLAQKLASGEIDS
SQFTEEALSQHLCMQNQGEVDLMIRTGGDFRISNFVLWQAAYAELVFTDTLWPDFDEQCF
KDAIALFASRQRRFGLTGSQIEEMRA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaacagggaaattaccgctgaaccgaccacagagtctatgcctcaagaggtc
tctgaactggtcaatcagtccctgccacgacatgtcgcaatcatcatggacggtaacggc
cgttgggcgcaggctcagggcaaacccagggtgatggggcataaggcaggggtgaaggcg
gtgcgccgcgctgtaagtaccgcgcgccagcttggcatcaagtctttgactctatttgca
ttttcaagtgagaactggcgcaggccagataccgaagtcagcctgctgatggaactgttt
ttcacagtgctgcgccgtgaactcaagttgctcgaccaaaatggggtacgcctgaacatc
attggcgataccagccgtttctccgagcgtctgcaaaagcaaattcgcgatgccgaggcc
aaaacggccaacaataccgagctggtgttgaacgtggcagccaactacggcggccgctgg
gatatacttcaggcagcgaatcagttggcacaaaagctcgcatctggtgaaatcgacagc
agtcagtttaccgaagaggcattaagtcagcatttgtgcatgcaaaatcaaggggaagtt
gatttaatgatccgcactggtggcgacttccgcatcagcaactttgtgctctggcaggcg
gcttacgctgagttggtgtttactgacaccctgtggcctgatttcgacgagcagtgtttt
aaagacgccatcgccctgtttgcgagtcgtcagcgccgtttcggattgactggaagtcaa
atcgaagaaatgcgcgcctga
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