Shewanella khirikhana: STH12_01061
Help
Entry
STH12_01061 CDS
T06711
Symbol
sucD
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
skh
Shewanella khirikhana
Pathway
skh00020
Citrate cycle (TCA cycle)
skh00640
Propanoate metabolism
skh00660
C5-Branched dibasic acid metabolism
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
skh01120
Microbial metabolism in diverse environments
skh01200
Carbon metabolism
Module
skh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
skh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
STH12_01061 (sucD)
00640 Propanoate metabolism
STH12_01061 (sucD)
00660 C5-Branched dibasic acid metabolism
STH12_01061 (sucD)
Enzymes [BR:
skh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
STH12_01061 (sucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AZQ10197
UniProt:
A0A3Q9E4L7
LinkDB
All DBs
Position
1212558..1213430
Genome browser
AA seq
290 aa
AA seq
DB search
MSVLINKDTKVICQGFTGGQGTFHSEQAIAYGTQMVGGVSPGKGGTTHLGLPVFNTVKDA
VAATGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEETGVRMI
GPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGG
DPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKANVTKPVVSYIAGVTAP
AGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKALREKTGW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtattgatcaacaaagataccaaggtaatctgccaaggttttaccggtggtcag
ggcactttccactctgagcaggctatcgcttacggtactcagatggttggtggtgtgtct
cctggtaaaggcggtactactcacctgggtctgccagtgttcaacactgtgaaagatgcc
gttgctgccactggcgccactgcttctgttatctacgtacctgcgcctttctgtaaagac
gccatcctggaagccatcgacggtggcatcgagctgatcgtatgtatcaccgaaggtatc
ccaactctggatatgctgcaggtgaaagtgaagctggaagaaactggcgttcgcatgatt
ggtcctaactgcccaggcgttatcactccaggcgaatgtaagattggtatcatgccaggt
cacatccacaagccaggcaaagtgggtatcgtttcccgttcaggcactctgacttacgaa
gccgttaagcagaccactgacgaaggtttcggccagtctacttgcgtaggtattggtggt
gacccaatcccaggtaccaacttcatcgacgtactggaaatgttccagaacgatcctcag
accgaagccatcgtgatgatcggtgaaatcggtggtactgccgaggaagaagctgctgct
tacatcaaggctaacgtgaccaagccagttgtgtcttacatcgccggtgttactgcacct
gccggtaagcgcatgggccacgccggtgctatcatcgccggtggtaaaggtactgccgaa
gacaaattcgctgccctggaagctgccggtgtaaccaccgttcgctctctggccgatatc
ggcaaggcgctacgtgaaaagactggttggtaa
DBGET
integrated database retrieval system
