Shewanella khirikhana: STH12_02395
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Entry
STH12_02395 CDS
T06711
Gene name
dacA
Definition
(GenBank) D-alanyl-D-alanine carboxypeptidase DacA precursor
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
skh
Shewanella khirikhana
Pathway
skh00550
Peptidoglycan biosynthesis
skh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
STH12_02395 (dacA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
skh01002
]
STH12_02395 (dacA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
skh01011
]
STH12_02395 (dacA)
Enzymes [BR:
skh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
STH12_02395 (dacA)
Peptidases and inhibitors [BR:
skh01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
STH12_02395 (dacA)
Peptidoglycan biosynthesis and degradation proteins [BR:
skh01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
STH12_02395 (dacA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
CytoC_RC
Motif
Other DBs
NCBI-ProteinID:
AZQ11474
UniProt:
A0A3S9L7D7
LinkDB
All DBs
Position
2729473..2730543
Genome map
AA seq
356 aa
AA seq
DB search
MAAKAYVLMDYHTGQIIAEEHAYEQLNPASLTKMMTSYVIGHEMKVGNISPEDDVQISKN
AWSKNFPDSSKMFIEVGKTVKAEDLNRGIIIQSGNDACVAMAEHIAGTEDAFVDMMNSWA
KQLGMTDSYFENSHGLDSDNHKTTAYDMAILGAALIRDVPDEYRIYAEKEFTFNGIKQYN
RNGLLWDKSMNVDGIKTGHTSGAGYNLVASATQDNMRLISVVMGAKSEAARKAESKKLLS
YGFRFFETVTPYKAGDSFVNQKIWYGDRESVDLGVATDTPLTIRRGKGKDLQANFELTKP
LEAPVAKGEVVGRVYFQLDGKDIAQFPLVTLQEVNEGSWFSKLMDYFKQLFASWFS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtggccgccaaggcctatgtgctgatggactatcacaccgggcagatcattgcagaagag
catgcctacgagcagcttaaccctgccagtctgaccaagatgatgaccagttatgtgatt
ggtcatgaaatgaaagtgggcaatatctcccccgaggacgatgtgcagatcagcaagaat
gcctggtcaaagaacttccctgactcttccaagatgtttatcgaggtaggtaaaacggtc
aaagccgaagatctcaaccgcggtatcatcattcagtcgggtaacgatgcctgtgtggcc
atggccgagcacattgccggcaccgaggatgccttcgtcgatatgatgaactcctgggcc
aagcaactgggcatgaccgacagctattttgaaaacagccatggtctggactctgacaat
cacaagaccaccgcttacgatatggcgattctcggcgcggcactgatccgcgatgttccc
gacgagtaccggatctacgccgagaaggaatttaccttcaacggcattaagcagtacaac
cgcaacggcctgttgtgggacaagagcatgaacgtggacggcatcaagaccggccacacc
tcaggcgcaggttataacctggtggcctccgcgacccaggacaatatgcgtctgatctcg
gtggttatgggcgccaagagtgaagctgcccgtaaggccgaaagcaaaaagctgctgtct
tacggattccgctttttcgaaaccgtgaccccatacaaagccggcgacagcttcgttaac
cagaaaatctggtacggcgatcgtgaaagcgttgatttgggtgtggccacagatacgcca
ctgaccattcgccgcggcaaaggcaaagatttgcaagccaactttgagctgaccaaacca
ctggaagcccctgtcgccaagggtgaagtggttggccgtgtctacttccagctggatggt
aaagacattgcccaattcccactggtcaccctgcaggaagtgaacgaaggcagctggttc
tccaaactgatggactacttcaagcagctcttcgccagctggttcagctaa
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