Shewanella khirikhana: STH12_02596
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Entry
STH12_02596 CDS
T06711
Symbol
gcvP
Name
(GenBank) Glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
skh
Shewanella khirikhana
Pathway
skh00260
Glycine, serine and threonine metabolism
skh00630
Glyoxylate and dicarboxylate metabolism
skh00785
Lipoic acid metabolism
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
skh01200
Carbon metabolism
Module
skh_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
STH12_02596 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
STH12_02596 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
STH12_02596 (gcvP)
Enzymes [BR:
skh01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
STH12_02596 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AZQ11665
UniProt:
A0A3Q9E6T6
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All DBs
Position
complement(2960211..2963099)
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AA seq
962 aa
AA seq
DB search
MTKQTLTELEQHELFLTRHIGPDADEQQAMLNYVGAESLEDLTKQIVPESIRLGRELNVG
PSNAEAEGLAYIRKLADKNQVFKSYIGMGYHGTEVPNVILRNVLENPGWYTAYTPYQPEI
AQGRLEAILNFQQLSIDLTGLDLASASLLDEATAAAEAMALAKRVSKAKKANRFFVADDV
FPQTLDVVKTRAECFGFEIVTGPAADAANHEDLFGALFQYTNRLGQLTDFTELFAKLREK
NVIVTVGADIMSLVLLKTPGAMGADVVFGSAQRFGVPMGFGGPHAAFFVSKDEHKRSMPG
RIIGVSKDTRGNTALRMAMQTREQHIRREKANSNICTAQVLLANMASFYAVFHGPQGLKV
IASRINRLADILAAGLAAKGVTVLNTQWFDTISFKADVDAVRARALAAGVNLRYDADGVM
GVSIAETTTRADLAELFDVILGAGHGLDVAALDADILARGSSSIPAALVREEAFLTHPTF
NSYHSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAAVEMIPVSWPEFANMHPFCPS
EQAEGYTQLIGELSDWLVDITGYDAVCMQPNSGAQGEYAGLLAIRKYHESRGEGHRNVCL
IPQSAHGTNPASAQLAGMKVVVTACDKEGNVDLDDLRAKAAEVAENLSCIMITYPSTHGV
YEETVREICDIIHQHGGQVYLDGANMNAQVGLTAPGFIGADVSHLNLHKTFAIPHGGGGP
GMGPIGVKKHLAPFVAGHAVVKQGIESDNNGAVSAAPFGSAGILPISWMYIKLLGSKGLK
QSTQTAMLNANYVTKKLSEHYPVLFRGRNDRIAHECIIDMRPLKEASGVTEMDVAKRLND
YGFHAPTMSFPVAGTLMIEPTESESKAELDRFIEAMVAIRGEIARVESGEWPVDNNPLAN
APHTMADIMDPAFDARPYSRELAVFPTESVRANKFWPTVNRIDDVYGDRNLFCACVPMSD
YE
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcaaaccctcacagagctggaacagcacgagctgtttctgacccgtcacata
ggtcccgatgccgacgagcagcaagccatgctgaactacgttggtgccgagtcactggaa
gatctgaccaagcaaatcgtacccgagtctatccgcctgggtcgtgagctgaacgtgggt
ccatccaacgccgaagccgaaggtctggcctatatacgtaagctggccgacaaaaaccag
gtgttcaagagctacatcggcatgggttaccacggcaccgaagtgccaaacgttatcctg
cgtaacgtgctggaaaatccaggttggtacacagcttacaccccttaccagccagaaatc
gcccagggccgacttgaagccatcctgaacttccagcagttgtccatcgacctgaccggt
ctggacctggcctcagcctccttactggacgaagccactgccgctgccgaagccatggcg
ctggccaagcgtgtatccaaggccaagaaagccaaccgcttcttcgtagccgacgacgta
ttcccacaaacactggacgtggtaaagacccgcgccgagtgttttggctttgagattgtg
accggtccagctgctgatgccgctaaccatgaagacctctttggtgccctgttccagtac
accaaccgtctgggtcaactgaccgatttcaccgagctgtttgccaagctgcgtgaaaag
aacgtaattgtgaccgtgggcgccgacatcatgtcgctggtgctgctgaagaccccgggt
gccatgggcgccgacgtggtattcggctctgcccagcgctttggcgtgccaatgggcttt
ggtggcccacacgctgccttctttgtgtccaaagacgagcacaagcgctctatgccaggc
cgtatcatcggcgtgtccaaagacacccgtggcaacaccgccctgcgtatggccatgcaa
acccgcgagcagcacatccgccgcgaaaaggctaactctaacatctgtaccgcacaggtg
ctgctggccaacatggcgtctttctacgccgtattccacggcccacaaggtctgaaggtt
attgcctcacgcattaaccgtctggccgacatcctggccgccggtctggctgccaagggt
gtgactgtactgaacacccagtggttcgataccatcagcttcaaggccgatgtggacgcc
gtacgcgcccgcgccctggctgccggtgtgaacctgcgctatgacgccgacggcgtgatg
ggcgtaagcattgccgaaaccaccacccgcgccgaccttgccgagctgttcgatgtgatc
ctgggcgccggtcatggtctggatgtagcggcgctcgatgccgatatcctggccaggggt
tcaagctctattcctgcggccctggtgcgtgaagaagctttcctgactcacccaaccttc
aacagctaccacagcgaaaccgaaatgatgcgctacatcaagcgcctcgagaacaaggat
ctggcactgaaccactccatgatctcgctgggttcctgcaccatgaagctcaacgctgcc
gttgagatgatcccggtgagctggcctgaatttgccaacatgcacccattctgcccatct
gagcaggccgagggttacactcagctgattggtgaactgtctgactggctggtggacatc
actggctacgatgccgtgtgcatgcagcctaactcaggtgctcagggcgaatacgcaggt
ctgctggccatccgcaagtaccacgagtcccgtggcgaaggccaccgcaatgtgtgtctc
attcctcagtctgcccacggcaccaacccggcttctgcccagctcgctggcatgaaagtg
gtggttaccgcctgtgataaagaaggtaacgtggatctggacgacctgcgcgccaaggct
gccgaagtggccgagaacctgtcgtgcatcatgatcacctatccttctacccacggtgtg
tacgaagaaaccgtgcgtgaaatctgtgacatcattcaccagcacggcggccaggtatac
ctggacggtgccaacatgaatgctcaggtaggcctgaccgcccctggctttatcggtgcc
gacgtatcgcacctgaacctgcacaaaaccttcgccatccctcacggcggcggtggtcca
ggcatgggcccaatcggcgtgaagaagcacctggcgcctttcgtagccggtcacgctgtg
gttaagcaaggtatcgagagcgacaacaatggcgccgtatctgccgcaccatttggcagc
gccggtatcctgccaatcagctggatgtacatcaagctgctgggcagcaagggtttgaag
caatctacccagaccgccatgctgaacgccaactacgttaccaagaagctgtctgagcac
tatccggtgctgttccgtggccgtaacgatcgtattgcccacgagtgcatcatcgacatg
cgtccgctgaaagaagcctctggtgtaaccgagatggacgtggccaagcgtctgaacgac
tacggtttccacgccccaaccatgagcttcccggttgccggcaccctgatgatcgagcca
actgagtctgaatccaaggccgagctggaccgcttcatcgaggccatggttgccattcgc
ggcgaaatcgcccgtgttgagagcggcgagtggccggttgacaacaacccactggccaac
gccccgcacaccatggctgacatcatggacccggccttcgatgcccgcccatacagccgt
gaactggcggtgttcccaaccgagtcagtgcgtgccaacaagttctggccaacggtgaac
cgtatcgatgacgtttatggcgatcgcaatctgttctgtgcttgtgtgccgatgagcgac
tacgagtaa
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