Shewanella khirikhana: STH12_03401
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Entry
STH12_03401 CDS
T06711
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
skh
Shewanella khirikhana
Pathway
skh00130
Ubiquinone and other terpenoid-quinone biosynthesis
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
skh01240
Biosynthesis of cofactors
Module
skh_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
STH12_03401 (menD)
Enzymes [BR:
skh01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
STH12_03401 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
AZQ12461
UniProt:
A0A3S9LA50
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Position
3859797..3861518
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AA seq
573 aa
AA seq
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MDHTHPGTAELNLLWGSLILEELSRYGVQHLCMAPGSRSTPLTLAAAAQNKLSRHLHFDE
RGLGFLALGLAKASGTPVAIITTSGTAVANLYPAIVEAWLTRVPLIVLSGDRPWELIGCG
ANQAIPQPGIFGQYAEPLNLPAPSRQIAPEALLSSIDEKLANLSRPLHINCMYREPLYPS
EASELSGFDGYLGRLSHWQATQTPYLDIAPSRPFSPPPRDAMMRFVHGKGVIVAGTLTED
EAPLELITLAQKLGWPLLTDAQCQLRQHPGAIGHIDQLLLSPRAKGLLEQADRVLVFGAR
LLSKRLIAFLAEKDWHSHWQVLPAQERLDPSHSCKQLWLGRAGEMAALDWPRSSEANWAN
ELTALNQAVEQDFIHHIDGSEFGEAQVVRAIAASHTAEQQLFIGNSLPVRLYDMFAPIGC
CAASTFTNRGASGIDGLLATACGVARHQGRPTTLIIGDLSALHDLNSLALARSCQSPLVI
VVLNNDGGNIFNLLPVPSENLRSDFYRLSHGLEFGYGAAMFGLPYDRAEDMDSFMEAYQS
ALEHPGASLIEVTVAHDQASNQIKRMAEWMRSR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggaccatactcatccaggcactgccgaactcaatctgctttggggctcacttattctc
gaagagctgtcgcgctatggcgtgcagcatctgtgcatggcgccgggctcgcgctccacg
ccactcactctggcggctgccgcccaaaacaagctcagtcgccatctgcatttcgatgaa
cgcggactgggctttctggcgctgggactggccaaggccagtggcacaccggtagccatc
atcaccacttcaggcaccgcggtggccaatctctaccccgccattgtcgaagcctggctg
acccgggtgccgctgatagtgctctccggcgaccgtccctgggagctgattggctgcgga
gccaatcaggccattccccagcccgggattttcggccagtatgctgagccgctgaacctg
ccggcgccaagccgccagatagcaccagaagcgctgctcagcagcatcgacgaaaagctt
gccaacctcagccggccactgcacatcaactgcatgtaccgcgagcccctgtatcccagc
gaagcgtctgaactaagcggtttcgacggctatcttggccgcctcagccactggcaggcc
acccaaacgccctacctcgacatagcgccatcgcgccccttcagcccaccgccgagggac
gccatgatgcgcttcgtccacggcaagggcgtgatagtggcaggcacactcaccgaagac
gaggcgccactggaactcatcacgctcgcgcaaaagcttggctggccgctgctgaccgat
gcccagtgccaactgcggcaacatccgggggccattggccatatcgaccaactgctgctg
agccccagagccaaaggcttgctggaacaggccgatcgggtgctggtgttcggcgctcgt
ctgctgtcaaaacggcttatcgcctttttggccgaaaaagactggcacagccactggcag
gtattgcccgcacaggagcggctcgatcccagccacagctgcaagcaattgtggcttggc
cgtgcgggtgagatggcggcgctggactggccacgctccagcgaggccaattgggccaat
gagctgacggcgctgaatcaggccgtggagcaggactttatccaccatatcgatggcagc
gagtttggcgaggcccaggtagtacgcgccattgccgcgagccacaccgccgagcagcag
ctctttatcggcaacagcctgccggtgcgcctgtacgacatgttcgcccccatcggctgc
tgcgccgccagcacctttaccaatcgaggcgcctccggcatcgatggcttgctggccacg
gcctgcggggtggcccgtcatcagggcagacccacaaccctgattatcggcgacctctcg
gcgctgcatgatctcaattcgctggcgctggccagaagctgccagtcgccgctggtcata
gtggtgctgaacaacgatggcggtaatattttcaatctgctgccggtgccttccgagaat
ctgagaagcgatttttaccgtctgagccacggactcgaatttggctatggcgcggccatg
ttcggcctgccctacgacagagccgaagacatggacagctttatggaagcctatcagagc
gcactggaacatcccggcgccagcctgattgaagtgacagtcgcccacgaccaggccagc
aatcaaatcaaaaggatggcagagtggatgcgaagccgctga
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