KEGG   Shewanella khirikhana: STH12_04042
Entry
STH12_04042       CDS       T06711                                 

Gene name
murD
Definition
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
skh  Shewanella khirikhana
Pathway
skh00471  D-Glutamine and D-glutamate metabolism
skh00550  Peptidoglycan biosynthesis
skh01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:skh00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00471 D-Glutamine and D-glutamate metabolism
    STH12_04042 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    STH12_04042 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:skh01011]
    STH12_04042 (murD)
Enzymes [BR:skh01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     STH12_04042 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:skh01011]
 Precursor biosynthesis
  Amino acid ligase
   STH12_04042 (murD)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C
Other DBs
NCBI-ProteinID: AZQ13076
UniProt: A0A3S9LC39
LinkDB
Position
4578705..4580036
AA seq 443 aa
MGLPLDKPHTHIVLGLGATGLSVVRFLTGKGIAPLVMDSRRQPPGMETLAAEFPDVPLVS
GGFDCRHLVQAQQIIISPGIAVDTPEVRAAMDMGIEVIGDVELFARELAERAPCVLAITG
SNGKSTVTTLVGDMAAADGKKVAVGGNIGVPALDLLSQSAELYVLELSSFQLETTHSLKC
IAATCLNISEDHMDRYADLEAYRQAKLRIYPQSKLSVFNRDDLATEPNDPCHTTSFGLGI
PEGDEWGLMDGKVYHGTSEIMNLLDVALIGAHNHANLLAAMALCEAAGISREAMVKVARE
FTGLSHRCELVANHDNIAWVNDSKATNVGATAAALNGLRDHLGDIILIAGGDGKGADFEP
LRIAFASVTHLITLGRDGDKIAELKEGAIRVANMAEAVDKAKALANPGDIVLLSPACASL
DMYANFMARGDDFRANVERVYGE
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgggtctgccgctggataagccacatacacacatagtgctgggcctgggtgccacaggg
ctgtctgtggtgcgctttttgactggcaaaggcattgcgccgctggtgatggacagtcgt
cgccagccgcccggtatggagactctggctgccgaatttccggatgtgcccctggtgagt
ggcggctttgattgccgtcatctggtacaggcgcagcagattatcatcagcccgggcatt
gcggtggatacccccgaggtgcgcgctgccatggacatgggcatcgaagtgattggtgat
gtggagctgtttgcccgggaactggccgagcgtgcgccctgcgtgctggcgattaccggc
tccaatggtaaatccacagtgaccaccctggtgggcgacatggctgcggccgacggtaaa
aaagtggccgtgggcggcaacataggtgtgcctgcgctggatttgctgtctcagtctgcc
gagctttatgtgcttgagctgtcgagctttcagctggaaacgacccacagcctcaagtgc
attgccgccacctgtctgaacatcagcgaagaccatatggacagatacgccgatctggaa
gcctatcgtcaggccaagttgcggatctatccgcagtcaaaattgagtgtgttcaaccgt
gacgatctggccaccgagccgaacgatccctgtcacaccaccagtttcggccttggcatt
cccgaaggggatgaatgggggctgatggatggcaaggtctatcacggcaccagtgaaatc
atgaacttgctggatgtggccctgattggtgcccacaaccatgccaacctgctggcggcc
atggcgctgtgcgaagcggccggtatttcccgcgaggccatggtcaaagtggcccgtgag
ttcacaggtctcagtcatcgctgcgagctggtggcgaaccacgacaacatcgcctgggtc
aacgactccaaagccaccaacgtaggcgccacagcggcggcgctgaatggcctcagggat
cacctgggcgacatcattcttatcgccggtggcgatggcaagggcgccgattttgagccc
ttgcggatcgcgtttgcctcggtgacgcaccttattactctggggcgcgacggcgacaag
attgccgagcttaaagaaggcgcgattcgtgtggccaacatggccgaggcggtggataag
gccaaggcgcttgccaatcccggtgacatagtgctgttgtcgccagcctgcgccagcctg
gatatgtatgccaactttatggcccggggtgatgacttcagggccaatgtggagcgggtc
tatggcgagtga

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