Streptococcus koreensis: D7D50_08690
Help
Entry
D7D50_08690 CDS
T06405
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ski
Streptococcus koreensis
Pathway
ski00521
Streptomycin biosynthesis
ski00523
Polyketide sugar unit biosynthesis
ski00525
Acarbose and validamycin biosynthesis
ski00541
O-Antigen nucleotide sugar biosynthesis
ski01100
Metabolic pathways
ski01110
Biosynthesis of secondary metabolites
ski01250
Biosynthesis of nucleotide sugars
Module
ski_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ski00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
D7D50_08690 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D7D50_08690 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
D7D50_08690 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D7D50_08690 (rfbB)
00525 Acarbose and validamycin biosynthesis
D7D50_08690 (rfbB)
Enzymes [BR:
ski01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
D7D50_08690 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
adh_short
NmrA
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
AYF94656
LinkDB
All DBs
Position
complement(1725459..1726505)
Genome browser
AA seq
348 aa
AA seq
DB search
MTEYKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEEILGDRVELVV
GDIADAALVDQLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRF
HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFG
VKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSTGVWAI
LTKGRIGETYLIGADGEKNNKEVLELILEKMGQPKDAYDRVTDRAGHDLRYAIDSTKLRE
ELGWEPQFTNFEAGLEETIKWYTDNQDWWKAEKEAVEANYAKTQEVLK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatacaaaaacatcatcgtaaccggtggcgctggtttcatcggttcaaacttc
gtacactatgtctacaacaaccatccagacgtgcatgtgactgtccttgacaaactcact
tacgcaggtaatcgtgccaacatcgaagaaatccttggggaccgtgttgaattggttgtg
ggtgacattgctgacgcagcattggttgaccaactggctgctaaggctgatgcgatcgtt
cactatgcggctgaaagccacaatgacaattcattgaatgacccatcaccatttatccac
acaaacttcattggtacctacacactcttggaagctgctcgtaaatacgatattcgtttc
caccacgtgtcaacagacgaagtgtatggagaccttccattgcgagaagatcttcctgga
catggggaaggtcctggtgaaaaattcactgcagaaaccaaatacaacccatcatcccct
tattcatcaaccaaggctgcttcagacttgatcgtgaaggcttgggttcgttccttcggt
gttaaggcaaccatttcaaactgttcaaacaactatggaccataccaacacatcgaaaag
ttcatcccacgtcaaattaccaatatcttgtctggtatcaaaccaaaactttatggtgaa
ggcaagaacgtccgtgactggatccacaccaacgaccactcaactggtgtttgggctatc
cttactaaaggccgtatcggtgaaacttacttgatcggtgccgatggtgaaaagaacaac
aaagaagtgcttgagttgatccttgaaaaaatgggacaaccaaaagatgcctacgaccgt
gtaacagaccgtgcgggtcacgatttgcgttacgccatcgattcaacaaaattgcgtgaa
gaattaggttgggaaccacaattcaccaacttcgaagcaggtttggaagaaaccattaag
tggtatacagataaccaagactggtggaaagccgaaaaagaagctgttgaagctaactac
gcgaaaacacaagaagttctcaagtaa
DBGET
integrated database retrieval system