Saccoglossus kowalevskii (acorn worm): 100372706
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Entry
100372706 CDS
T04123
Name
(RefSeq) DNA polymerase zeta catalytic subunit-like
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100372706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sko03400
]
100372706
Enzymes [BR:
sko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100372706
DNA repair and recombination proteins [BR:
sko03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
100372706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DUF4683
Motif
Other DBs
NCBI-GeneID:
100372706
NCBI-ProteinID:
XP_006811588
LinkDB
All DBs
Position
Un
AA seq
3274 aa
AA seq
DB search
MMNNNIDIVHPLFGDMKNDNDIVHIIGNMMNNDNDIVHSIGDMKNDNDIVHIIGNMMNND
NDIVHIIGDMKNDNDIVHIIGNMMNNNIDIVHIIGDMKNDNDIVHIIGNMMNNDNDIVQI
IGDMNNDNDIVHSIGDIMNNNIDINDNDIVHIIGDMNNDNDIVHIIGDIMKNDNDIVYII
GDTVNNDNDIVHIIGDMNNDNDIVHIIGDIMKNDNDIVHIIGDIILIVVDLLNGGAILNK
PFQPFEAHIPYLLQVFIDYNLYGMNLINLAAVKFRRPKQEGETSNQVYSQGSHSNTSVMT
PTTQTTMNSSVCSNLSIVSHQYWDAENIPRSQLLDADIVSQSVCEMEVDAVAADVTNRSE
ILSNIGTNPGLASIWEDEKQRRREKGESSQIPTPLSPDREDFPLTETEEMYQERLREVIQ
GYETLLESQIENEDSFNLSQDTIISHGESLPVSPLGGAMTRTPSSVVELHCSQFEGKDIP
TDDGESEDEAVIDEDAVNSILETSQSFRDSPIPASQILADTQDRQLAKILAQLADESGLE
DDSILSGTSQSQKLESSQSTPQNLQQKEENERELEESILMSQIWDDPDEDEVLSKQQEDS
VDDDGDYVIPQVDGGADDKTESETSNPKKICGLEKTNMRTAEDGTEQCDTNKCENKVVMD
NNLDGFSEIDTTAQKTFLNLDNINLANLQEDSVVISPSKVKSTTSCQKSKKRYSHLSGNV
TPRKKSVSKTILSTPPKDDTLSLESMLTNVRRSASKISMTIPSIDLEPVVLGSKPPMCKN
TKQQSLRMEQKRAKLSRRRQLVSDFPCERMQLLCPEDSNLPISVTLPVTQENSIFSNQSV
PINIGDGNIPCTDKALPVVDQNQPKNDDVSIDDIPVKVVTRRSSRRSKQSLMRRRLSLSS
DSSMSESNWNRRSDEDYREDEEDAEDDDFVIETKTLRSRKKTKPKKQGTDCTSRPYTLRT
KRTRSSTEVDVSLKYPADNMSVTSCKSEKSEKSVRSEKSTRSDKSGKSEKSESSDVCTPP
RKRKKGEAIPGIHYIIVNKFKGYKTMRVLVNRVKPISSVKVTKKMLQEIKEGFEKEKIRV
RPSLPNKEVTIHQIKKRRTNSQGSGQTKQGKEKGKDIERKETDDTDGGDDDDVGLEKTSI
PEGDEEGVFPRRQKPIYVRQYSGKFPEAKMQADLVFFDRYEFDKNSDGSQGEEGIQEKEG
NLRKENSDAATENENQKRTRKLRTCTRRKSSKSSETKHRRRSLRPNDSHFEPMFDEEHDD
SNTILMDTMWTLSYYSPHNSDSGEMSPPRCWSPAAKDRIKGSRGRGKSNRGRSKSPKSPR
RKGSSPRSCEDEDTNALLSDLHEVLYNAEGLDVRVDKESMIKEIENFEKIPEDAFEETIS
HSIGKIDYIDSIIRDCSSANSVESSSSVAKNKKVKGKGKVKKGKGKSKGKSSAGQGCPKM
CTTPPVTTASGGNTEYTQASSVGAPIQVNPLSAVGQSTSQMPSRSSGVQNQPPPPYQAPR
PPFSGFSENQSYSQRNQYPQSTFMGPNTSTNTYQTSYPNNYQQQQSSTFPQQGYSRDRPG
PLRMPSQQSNQVQYDLMSPPYMESDPNTSYSSQGNFSEFRNNQYSQDRMHLAPTTPTPMV
GQPSPSYNQVTSGVNKYGLSNQDSFNNYNYMGGQQQPQQGYMPNNPNYHRSRSYSHEEMK
NTSVPGNGYTQSSLTQYGSLSASRTASRSMSEPYNQTNMTQYGNSYPTSAQGDPHHVSPV
PADFYKGSDSQQHSGQITDDDHMRSKEMGSEKKKLNATDVGSQFSKASVQSNISGESGKR
CISGICDKDMWDEHDCSLTPAQRNQDNRSPSLSVTDSQKSENSISCITAKMKDSKSSENK
GLQKKLVSIKDWCIKMDSPSGLNKSTDSSTGSLKSLEDMDVDQRCEEKLSLILHTDSEIS
EDSPEMMRSRNKSENVMEIEKAPSLVLDKNPMTNGELQTQLPGTLPFNVTSVQEPTSPTQ
PDQDYDSMSLQPGQKSNSSVSSSKINKFVSVNSSQRGGDLDVGGAPPSQLSSSQLLSCQN
SMKIWTPADNPPTTDHVKKSLQEYDLPTVRHKKAYFSDPRDLPEKSSEVGGRQTKLHSVL
PMELPEFESKLSHKGLGNWKTVIATTEAMIHGTQYVSASDNIIEEIEKNPHLKAAYMGNQ
IAVLTPAKAPPPKVKVQAWLQEKITNKLKLNQKSQKDNQEDKIELVYEENNDENVEDNKI
LDKTPCEVDQSSKLCQSFESESDSEEEDTSVDVISPSPEAKKRRSSLFLFSRYQQSLQDP
NSNATPVKSAFHDVTARKRKSEQSPITVSQEHASTPTGLSRAILGDASSFSGPQHSTPTR
LSRPMQLTLPSCTPIHSLREGESEGQPLKAKLWEKKSSGTKNLRRALLSSQLKHQLVTPV
NRQLSDVSQIDGATPNNTCGFKVSMQNLQDAKSVQEVQHLTTMIMELQIRTRRDFHPDPE
MDPIQAIFYQIHSDFPAASGMKADITGVIVVDPSLANQKAADSDPSPSIVTPCCQGQRSL
LNRSGVNDLEVDYVTAEKTIFIELLKLVRKWDPDILVGYEIQMLSWGFLLKRAAIFDNDF
CPKLSRIPDCKRDSHFSSGRDEYRANHLSEIHIAGRIVINLWRLMRHEVTLNIYNYENVA
FHVLHQRHPRYSFRTLSDWFDHKTDLYRWRTVEYYTLRVRGQLQILSQLDLIGRTSELAR
LFGIEFYHVLSRGSQYRVESMMLRIAKPMNYIAASPSVQQRARSKAPECIPLNMEPESSF
YCDPVLVLDFQSLYPTMMIAYNYCFSTCLGRVKYIEEGGEIPLGCLSLNSSPGLIRKLQK
KDGIHVSPNGVAFIKRNVRKGVLPSINELTHSQGLERLLNARQLGLKLIANVTYGYTSAN
FSGRMPLIEIGDSVVRKGRETLERAIQLVENTPKWGAKVVYGDTDSMFVLLKGRSKDEAF
KIGHEIAAKVTADNPKPVKLKFEKVYLPCVLQTKKRYVGYSYETEDQKEPVFDAKGIETV
RRDACQAVAKILERSLKLLFNTKDVSQVKKFVQHQFQKISEGRVGMQDLIFAKEYRGMAG
YRPGACVPALEISKRLLSVDRCAEPRVGERVPYVIVYGSPGLPLIQLVRRPVEVLQDSNL
RLNATYYISKQILPPLNRVFSMMGIDVNTWYSELPKVMKVPSFSGQTSLRKGTISQYFNA
MNCPVCGELTQQLLCSTCQTDPQRVTVVLNTKIHEWDQNYYNLSKICYNCCGSNDPTLVC
VSMDCPVLFKISKANRDILKSENLRELQTSMLEF
NT seq
9825 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaataatattgacattgtacacccattatttggtgacatgaagaatgataat
gacattgtacacattattggtaacatgatgaacaatgataatgacattgtacacagtatt
ggtgacatgaagaatgataatgacattgtacacattattggtaacatgatgaacaatgat
aatgacattgtacacattattggtgacatgaagaatgataatgacattgtacacattatt
ggtaacatgatgaacaataatattgacattgtacacattattggtgacatgaagaatgat
aatgacattgtacacattattggtaacatgatgaacaatgataatgacattgtacaaatt
attggtgacatgaacaatgataatgacattgtacacagtattggtgacatcatgaacaat
aatattgacattaatgataatgacattgtacacattattggtgacatgaacaatgataat
gacattgtacacattattggtgacatcatgaagaatgataatgacattgtatacattatt
ggtgacaccgtgaacaatgataatgacattgtacacattattggtgacatgaacaatgat
aatgacattgtacacattattggtgacatcatgaagaatgataatgacattgtacacatt
attggtgacatcatattaatagttgttgatcttctcaatggtggtgctatcttgaataaa
ccttttcaaccatttgaggctcatataccatatctcctgcaggtgtttattgattataac
ttgtatggtatgaatttaataaacttagctgccgtgaagttcagacgacccaaacaagaa
ggggagacatcaaatcaagtctatagtcaaggtagtcatagtaacacttcagtcatgact
cctacaacacagacaacgatgaactcctcagtctgcagtaacttgtctattgtgagtcat
cagtattgggatgctgaaaatattcctcgttctcagttgcttgatgctgacattgtcagt
cagagtgtatgcgaaatggaagtagatgctgtagctgccgatgtcactaacagatcagag
atactaagtaacatagggaccaatccaggacttgcttcaatctgggaagatgagaaacag
agacgccgtgaaaagggggaatcatctcaaataccaacgccgttgtcaccagacagagaa
gactttccattgacagaaacagaagagatgtaccaagagagactgagagaagttatacag
ggatatgaaacattacttgaaagtcaaattgaaaatgaagatagtttcaacctatcacag
gacactattatatctcatggagagtcgcttccagtgtcaccactagggggcgctatgact
agaacgccatcatcagttgttgaactccattgctcacagtttgaaggcaaagatattccc
acagatgatggagaaagcgaagatgaagccgtaatcgatgaggatgccgtgaacagtatt
cttgaaactagtcaaagttttagagattccccaatcccagcatcacaaatactagccgac
acacaagacaggcaactggccaagatattagcacaacttgctgatgagagtggcttggaa
gatgacagtatactatcagggacaagtcaaagtcagaaacttgaaagcagccaatcaacc
cctcagaatttacaacagaaagaagagaatgaaagggagctggaagaaagtatattgatg
tcgcagatatgggatgaccctgacgaggatgaagtgctttctaagcaacaggaggatagt
gttgatgatgatggtgattatgttattccacaagttgatggtggtgcagatgataaaaca
gaatctgaaacatctaatccgaagaagatatgtggattagaaaagaccaacatgcgaact
gcagaagatggaacagaacagtgtgatacaaataaatgtgagaacaaagttgtgatggat
aataacttagatggtttctctgaaatagacacaacagctcagaagacgtttctgaacttg
gacaatattaacttggctaatttgcaggaggactctgttgtgataagtccaagcaaggtt
aaatctactacctcatgtcagaaaagcaagaaacgttacagccatttgagtgggaatgtg
actcctagaaaaaaatctgtgtctaaaactatattaagtacacctcctaaagatgacacc
ttatcactggagtcgatgctgactaatgttagacgatcagcttctaagatttctatgacc
attccatctattgatttagaacccgttgtgttaggtagtaaaccaccaatgtgcaagaac
actaaacagcagagtctacgaatggagcaaaaaagagcaaaactgagcaggaggcggcag
cttgtgtctgattttccatgtgaacgtatgcaattactttgtcctgaagatagtaatctc
ccaatttcagtaactttgccagtcactcaagaaaattccattttttccaatcaaagtgtg
cctataaacattggggatggaaatataccatgtactgataaagcattgcctgtggttgat
cagaatcagccaaaaaatgacgatgtcagtattgatgacatccctgtgaaagtagttacc
cggagaagtagcagaagatctaaacagtcattaatgagacggcgactgtctttatccagt
gacagtagtatgagtgagagtaattggaatcgtagaagtgatgaagattacagagaagat
gaagaagatgctgaagatgatgattttgttatagaaacaaaaacacttaggtcaagaaaa
aagaccaaaccaaagaaacaaggcactgattgcactagtagaccatatacgttacgaaca
aaaagaacgcgaagttcaaccgaagtagatgtttctttgaaataccccgctgacaatatg
agtgttacttcctgcaagtctgagaaatctgaaaaatcagtcaggtctgaaaagtcaacg
aggtcagacaagtcaggtaaatcggaaaagtctgagtcctctgatgtttgcacaccaccg
cgaaaaaggaaaaaaggagaggcgattcccggcatccattacataattgttaataaattc
aaaggctataaaacaatgagggttctggtaaacagagtaaaaccaatttcctctgttaag
gtcaccaagaagatgctccaggagataaaagaaggttttgagaaggagaaaattagggtc
agaccatcattgccaaataaagaagttaccattcatcagattaaaaaaagaagaaccaat
tcacaaggttctggtcagaccaaacagggtaaggagaagggtaaagatattgagagaaaa
gaaactgatgatactgatggtggtgatgacgacgatgtgggtcttgaaaaaacttcaatt
ccagaaggagatgaagaaggtgtttttccaaggagacagaaacctatctatgttaggcag
tactctggaaagttcccagaggcaaagatgcaggctgatctggtgttttttgatcgctat
gaatttgataagaatagtgatggttcacaaggagaagagggtatccaagaaaaagagggg
aacttgagaaaagagaactctgatgctgcaacagagaatgagaaccaaaagagaactagg
aagcttcgtacatgtacaagaaggaaatcatcaaagtcttctgagacaaagcacaggaga
aggtctttacgtcccaatgatagtcattttgaaccaatgtttgatgaagagcatgatgat
agtaatacaatattaatggacacaatgtggactttgtcttattactctcctcacaactct
gacagtggggagatgtcaccaccaagatgctggtcaccggctgctaaggatcgtatcaag
ggttctcgtgggaggggcaaatctaatcgaggacgctctaaaagtcccaagagtccccga
cgcaaaggttccagtcccaggagttgtgaagacgaagacaccaatgcattattgagtgat
ctacatgaagtcttatataatgcagaaggtttggatgtgcgggttgacaaggagtcaatg
atcaaagaaattgaaaactttgaaaaaattcctgaagatgcctttgaagaaactatctcg
cattctatagggaaaattgactacattgactcaatcattagagattgtagcagtgcaaac
tctgttgaaagtagtagctctgttgcaaaaaacaaaaaagtcaaaggcaaaggtaaggtg
aagaagggaaaagggaaaagcaaaggaaaatcaagtgctggacagggttgcccaaagatg
tgcacaactccacctgtaacaactgcatcaggaggtaatactgagtacacacaagcaagt
tctgttggagctccaatccaagtaaaccctttatcagctgttggacaaagcacgagtcaa
atgccttctcgatcttctggggtacaaaaccaaccacctcctccttaccaagcaccaaga
ccccctttcagtggcttctctgaaaatcaaagctattcacaaagaaatcagtatccacag
tctactttcatggggccaaataccagtacaaacacttatcaaacatcatatccgaataat
taccaacagcaacaaagcagtacatttcctcaacaggggtattccagagacagacctgga
ccccttcgcatgccttctcagcaaagtaaccaggttcaatacgaccttatgtcaccacca
tacatggagtcagacccaaacacttcatactcatctcaagggaatttttctgagttcagg
aataatcaatattcccaggatagaatgcatctggccccaacaactccaactccgatggtt
ggacaaccatctccaagttacaatcaagtgacaagtggagtcaataaatatggattgtca
aatcaggattcattcaataactataactacatggggggacaacaacagccgcagcaaggt
tacatgcctaacaaccctaattatcacaggtccaggtcatacagccatgaggaaatgaag
aatacctctgttcctggaaatggctacacccagtcgtctctgactcagtatggatcacta
agtgccagtcgtacagcctccaggagcatgtctgaaccttacaatcaaactaacatgact
cagtatggcaactcctatccgacatctgcccagggagatccacaccacgtttcaccagtg
cctgcagatttctacaagggttctgattctcagcaacatagtggccagataactgatgat
gaccatatgaggtctaaggaaatgggcagtgaaaaaaaaaagctgaatgccactgatgtg
ggaagtcagttttctaaagccagtgttcagagcaatattagtggagaaagtgggaaaagg
tgtatttcggggatatgtgacaaggacatgtgggatgaacatgattgtagtttgactcct
gctcagaggaatcaggacaaccgtagtccttcattgagtgtaacagattctcaaaaaagt
gaaaatagtatttcatgtattactgccaaaatgaaagacagtaaatcatcagaaaataaa
ggtttacaaaaaaaacttgtttctatcaaggactggtgcatcaaaatggacagtccatca
ggactgaataaaagtactgattcttcaaccggcagtttaaaatcattggaggacatggat
gttgatcagagatgtgaagagaagctgtcgttaatacttcacactgacagtgaaatatca
gaagatagtcctgagatgatgaggagtagaaataaatctgaaaatgtgatggagatcgaa
aaagctccatcattagttttggacaaaaatcccatgactaatggtgaattgcagactcaa
cttccaggaactttaccttttaacgtgaccagtgtacaggagccaacttctccaacacaa
ccagatcaggactatgattccatgagtttacaacctggccagaaatcaaattcttctgtg
tcatcatcaaaaataaataaatttgtttcagtaaactcttcacagaggggtggtgatttg
gacgtgggtggggcacccccatcacaactgagttcatcccagcttttatcttgtcaaaac
tctatgaaaatttggactcctgctgataatccaccaacgactgatcatgttaaaaagagt
ctacaggaatatgatcttccaacagttcggcacaagaaagcctacttcagtgatccaaga
gatttgcctgagaagtctagcgaagttggtggaagacagactaagttgcactctgttctt
cccatggagctaccagagtttgagagtaaattgtcccataaaggtcttgggaattggaag
actgttattgctaccacagaagccatgatacatggaacacagtatgttagtgccagtgat
aacattattgaagagatagaaaaaaatccacatttgaaagcagcttacatggggaatcag
attgcagtattaacacctgctaaagcaccaccgcccaaggtgaaggttcaggcgtggctt
caggagaagattaccaacaagttgaagctgaatcaaaagtctcaaaaggataatcaagag
gataaaattgaacttgtatatgaggagaataatgatgaaaatgttgaggataataaaata
ttagataaaacaccatgtgaggtggatcagagtagtaaattgtgtcagagttttgaatca
gaatctgactctgaagaggaagatacttctgttgatgttataagtccttcaccagaagca
aaaaaacgtaggtcttccctttttctgttttcacgctaccaacaaagtttgcaggatcca
aatagtaatgcaacaccagtgaaaagtgcattccatgacgttacagcgagaaagaggaaa
agtgaacaatctccaataactgtatcacaggaacatgcatctacacccactgggttatca
agggcaatactgggagatgcttcttcattttctggtccacagcatagcacaccaaccaga
ctatcacgaccaatgcagctgactttaccaagttgcacacccatacattcactgcgtgaa
ggtgaaagtgaaggacaaccattgaaggctaaactttgggaaaaaaagtctagtggaaca
aagaatttacggagagcattattatccagtcagttaaagcatcagcttgtgaccccagtg
aatcgccaactgtcagacgtctctcagattgatggagccactcctaataacacatgtggt
tttaaagttagtatgcagaatttacaggatgccaaatcagtgcaagaggttcagcacctc
actactatgatcatggaattacagatcagaactcgaagagatttccatccagatccggag
atggatcccattcaggccatcttttaccaaatccactcagatttccctgcagcatctgga
atgaaagctgatatcactggtgtcattgtagtagatcccagcttagccaatcaaaaagca
gctgacagcgaccctagcccatccatagtaactccatgttgccaaggccaaaggtcattg
ttaaataggtcaggggtgaatgatcttgaggttgactatgtgacagccgagaaaaccata
tttattgaacttctgaaacttgtcagaaaatgggatccagacatactagttggttatgaa
atccagatgttgtcatggggattccttttaaaaagagcagccattttcgataatgatttc
tgtccaaagctatcaagaattccagactgcaagagagacagtcacttttcatcaggtcgt
gatgaatacagagccaatcatttgtcagaaattcatatcgctgggagaatagttattaat
ttatggcgtctgatgcgccatgaggttactttaaatatttacaattatgaaaatgttgca
tttcacgtcctccatcagcgtcatccacgatattcattccgtacattgtctgactggttt
gatcataaaaccgatctttacagatggagaacagttgaatactacacattacgggtcaga
ggtcaacttcagatattaagtcagctggatttgattggtagaaccagtgagttagcgagg
ttgtttgggattgaattctatcatgtcttgtcaagaggatctcaatatcgtgttgaatca
atgatgttacgaattgctaaaccaatgaattacatagctgcatctcccagtgtacaacag
agggcaaggagtaaagcaccagagtgtataccattgaacatggagccagaatccagtttc
tattgtgatccagttttggtgttagatttccagtctctttatcccactatgatgattgca
tataattattgtttttcaacgtgtctaggaagagtcaagtacatagaagaaggtggagaa
attccattgggatgcttgtctttgaatagttcacctgggttgatacgaaaactgcaaaag
aaagatggcatacatgtgtcacccaatggtgtggcttttatcaaacggaatgtcaggaaa
ggtgtactccctagtatcaatgaattaactcattcacagggtttagaaagactgctaaat
gctcgtcagcttggattgaaattaattgctaatgtgacatatggttatacctctgctaat
ttctctggtaggatgccattgattgagattggtgacagtgttgtaagaaaaggacgtgaa
actctagaaagagccatacagctggtagaaaacacaccaaaatggggagctaaagttgtc
tatggagatactgatagtatgtttgtgttgttgaaaggtcgaagtaaagatgaagccttc
aagattggacacgaaatagcagctaaagtgacagccgataatccaaaacctgtgaagcta
aaatttgaaaaggtatatttaccctgtgttctacaaacaaagaagagatatgttggctat
agttatgagactgaagatcagaaggaacctgtctttgatgccaagggtattgagacagtt
agaagagatgcttgtcaagctgttgccaagatcctggagaggtcgttaaaactactgttc
aatacaaaagatgtgtcgcaagtaaagaagtttgtacagcatcagtttcagaagatatct
gaaggccgtgttggaatgcaggatttgatatttgctaaggagtaccgtggcatggcaggg
tataggcctggtgcatgtgtacctgcactggaaatatccaaacgtttgctatctgtagac
cgttgtgcagagcccagagtcggtgagagagttccgtatgttattgtatatggaagccca
ggtttacctttaatacagctggtgagaagacctgtggaagttttacaggacagtaattta
cgattaaatgcaacatactatataagtaaacagattcttccgccattaaatcgggtgttt
tctatgatggggattgatgtgaacacttggtatagtgaattgccaaaagtcatgaaagta
ccttcttttagtggacagacgtcactccgaaagggtactatatcccagtacttcaatgcc
atgaattgtccagtatgcggtgaattaactcaacaattgttgtgcagcacatgtcagaca
gaccctcagagagtcacagtggtgttgaatacaaagatacatgaatgggatcagaattac
tacaatttatctaagatctgctataactgttgtggaagcaatgatcctactcttgtatgt
gtatcaatggattgtcctgtgctcttcaaaatatccaaagctaacagagatatattaaaa
tcagaaaatctacgcgaactacaaacaagcatgctggagttttga
DBGET
integrated database retrieval system
