KEGG   Saccoglossus kowalevskii (acorn worm): 100373894Help
Entry
100373894         CDS       T04123                                 

Definition
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100373894
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sko03019]
    100373894
   04121 Ubiquitin system [BR:sko04121]
    100373894
Enzymes [BR:sko01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100373894
Messenger RNA biogenesis [BR:sko03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     100373894
Ubiquitin system [BR:sko04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    100373894
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: zf-TRAF TRAF_BIRC3_bd zf-TRAF_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-C3HC4_3 REGB_T4 PTRF_SDPR TSC22 zf-RING_UBOX BAR_3 DUF4407 DUF489 DUF16 STAT_alpha
Motif
Other DBs
NCBI-GeneID: 100373894
NCBI-ProteinID: XP_002741094
LinkDB All DBs
Position
Un
AA seq 897 aa AA seqDB search
MVGFSKDIFIQSLVEDKYLCQLCEKVLCDPIQTYCGHRYCETCFEDLLRNNDNVLCSSCK
AEGIMDTILSVQQMYHDKAIQRELNIQHVRCLNKGCDWTGSFEDYRVNHILTCEYEMIQC
VNRNGCNVSIQRGNLSSHLEKDCPMRIVKCEYCTVEVPFTNIETHLLECPKIPEKCKLCG
EFVPREMIEQHTDTKTGDCVRKMIACQFQNVGCHDMVEKSKMAEHNTRSMGEHLLMMLQF
IISLMAMVRSTRNKIDEVENVRTRINEHENQIKQLEKNEETLHHKMTEMVSAAQNENRNG
IITGENKHLADKHEQSTRALNNSMTVVNKKLATCEGVVAVLNNQDMVGFSKDIFIQSLVE
DKFLCQLCEKVLCDPIQTYCGHRYCKTCFEDLLRYNESVYCNACKAEGIDDTVLTSQQIY
PDRAIVRELNSQDVQCVNVGCNWTGNFRDYHLNHIPTCEYEMIQCVNRNGCNVSIQRGHL
SSHLEKDCPMRIVKCEYCTVEVSFTNIEIHLLECPKTPEKCKFCGEFLPREMMEQHTDTK
TGDCVRKLIACQFQDVGCHDMVEKSKTAEHNTRSMGEHLLMILQFIISLMAMVRSMRDKI
DEVENVRTRINEHENQIKQLEKNEKTLHHKMTEMVSAAQNEKRNGIITGENKDLVEKYEQ
STRALDNSMTVANKKLATCEGVVAVLNNQVEKTDETVTLLSLQQKKYTEMIEALERKVKA
QDRIIALKDVAIAEQDLRIQSLEMASYDGVLVWKITDFARKRQDAISGRTTSIYSPCFYS
SRHGYKMCARIYINGDGMGKGNHVSLFFVIMKGESDALLRWPFRQKVTMMWLDQNNRNHV
IDAFRPDPTSSSFQRPKHDMNIASGCPLFMPLSDLDSPLHHYVKDDTAFIKIFIGGS
NT seq 2694 nt NT seq  +upstreamnt  +downstreamnt
atggtcggtttttcaaaagatatattcatccagtcactggtagaagataaatacttgtgt
caactatgtgagaaagtactgtgtgatccaatccagacatattgtggacatagatactgt
gaaacatgttttgaagacctgttaagaaacaatgataatgtactttgcagttcgtgtaaa
gctgaaggcattatggataccatattgagtgtgcagcagatgtaccacgataaagccata
caacgagagttgaacatacagcatgtacggtgcttaaacaaaggctgtgattggacgggg
agctttgaagattaccgagtgaatcatattctgacttgtgaatatgaaatgatacaatgt
gtcaatagaaatggatgtaatgtatcaattcaacgtggaaatctatcatctcatctggag
aaggattgtccaatgagaatagtgaagtgtgaatactgcacagtagaagttccatttacc
aatatagagactcatctactcgaatgtcccaaaattccggagaaatgcaaattatgtgga
gagtttgtaccacgagaaatgattgagcaacatacagatacgaaaacaggtgactgtgtt
agaaagatgatagcatgccaatttcagaacgttggatgtcatgatatggtggagaaatcc
aagatggcggagcataataccagatctatgggtgagcatttattgatgatgttacagttc
ataatatctcttatggcaatggtacggagtacacgaaataaaattgatgaagttgaaaac
gtgagaacaagaattaacgaacatgaaaatcaaataaaacaactggaaaagaatgaggaa
acactgcaccataagatgactgaaatggtttcagccgcacaaaatgaaaaccgtaatgga
ataataactggagaaaacaaacatcttgcagataaacacgaacagtcaacacgagcattg
aacaactctatgacggttgtcaacaaaaaactagctacctgtgagggcgtggttgctgtg
ctcaacaatcaagacatggtcggtttttcaaaagatatattcatccagtcactggtagaa
gataaattcttatgtcaactctgtgagaaagtactgtgtgatccgatccagacttattgt
ggacatagatactgtaaaacatgttttgaagacttgttaagatacaacgagagtgtatac
tgtaatgcatgtaaagctgaaggaatagacgacactgtgttgacttcacaacagatctac
cccgatagagcgatagtgagagagctcaattcacaggacgtacaatgcgtcaatgtcggc
tgtaattggaccgggaatttcagagattatcatttgaatcatattccgacttgtgaatat
gaaatgatacaatgtgtcaatagaaatggatgtaatgtatctattcaacgtggacatcta
tcatctcatctggagaaggattgtccaatgagaatagtgaagtgtgaatactgcacagta
gaagtttcatttaccaatatagagattcatctactcgaatgtcccaagactccggagaaa
tgtaaattctgcggagagtttttaccacgagaaatgatggagcaacatacagatacgaaa
acaggtgactgtgttagaaagttgatagcatgccaatttcaggacgttggatgtcatgat
atggttgagaaatccaagacggcggagcataataccaggtctatgggtgagcatttattg
atgatattacagttcataatatctcttatggcaatggtacggagtatgcgagataaaatt
gatgaagttgaaaacgtgagaacaagaattaacgaacatgaaaatcaaataaaacaacta
gaaaagaatgagaaaacactgcaccataagatgactgaaatggtttcagccgcacaaaat
gaaaaacgtaatgggataattactggagaaaacaaagatcttgtagaaaaatacgaacag
tcaacacgagcattggataactctatgacggttgccaacaaaaagctcgctacctgtgag
ggcgtggtcgcagtgctcaacaatcaggtggaaaaaacagacgaaactgtaactttgttg
tcattacaacagaagaagtatactgagatgatagaggcattagaaagaaaagtgaaagca
caagatagaattatcgctttaaaagatgttgctattgctgaacaagatttgagaatacaa
agtctggaaatggcgtcctatgatggtgtgttggtttggaagataacagacttcgcccgt
aaacgacaagacgccatcagtggaagaaccacctctatctactcaccttgtttttatagt
agtcgccatggatacaagatgtgtgctcggatatatatcaatggtgatggaatggggaag
ggtaaccacgtatctttgttctttgtgatcatgaagggagagtctgacgccctcttgcga
tggccattccgtcagaaggtcacgatgatgtggttagatcagaacaacagaaatcacgtg
atcgatgcatttcgacctgaccctacttcaagttcatttcaacgtcccaaacacgacatg
aacattgccagtggatgtcctctatttatgcctctatcagatttggacagtccacttcat
cattacgtcaaagatgacacagcatttatcaaaatatttatcggtggatcctaa

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