Saccoglossus kowalevskii (acorn worm): 100378765
Entry
100378765 CDS
T04123
Definition
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100378765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100378765
04121 Ubiquitin system [BR:
sko04121
]
100378765
Enzymes [BR:
sko01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100378765
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100378765
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
100378765
SSDB
Motif
Pfam:
TRAF_BIRC3_bd
TMCO5
Other DBs
NCBI-GeneID:
100378765
NCBI-ProteinID:
XP_006816482
LinkDB
Position
Un
AA seq
329 aa
MPQHLETTVVKHLDLIRDKVSNVSDEFATLKVNLDVPALSQNVKSNADRIVIVERAVQKV
EQDLVDVTTRQQGQQPTRGVQAIIDKQSRSIEELKAKTIVLDTKVSTYEGIVAVLNGQIE
RDANVVQAMERERKQDRDLVESLERKIKSQDRIIALKDVALAEQDLRIQSLEMASYDGVL
VWKISDFNRKRNDALSGRTTSIYSPCFFTSRHGYKMCARVYLNGDGMGKGNHVSLFFVIM
RGTFDGLLRWPFRQKVTFMLLDQNNREHVIDAFRPDPTSNSFKRPTGDMNIASGCPLFMP
LSQLESSRHAYVKDDSMFIKVIVDTTDLN
NT seq
990 nt
+upstream
nt +downstream
nt
atgccccagcatttggaaacaactgttgtaaagcatcttgatttgattcgtgataaagta
tccaatgtgagtgatgaatttgcaacactgaaggtgaatcttgatgtaccagcactatcc
cagaatgtgaaaagtaacgccgaccgaatcgtgatagtagaacgtgctgttcagaaggtg
gaacaagacttggttgatgtgaccactaggcagcaaggtcaacaacctacaaggggtgta
caagctatcatcgataagcagtctcgctcaattgaagaattgaaggccaagaccattgta
cttgacactaaggtatctacgtatgaagggattgttgccgtactcaacggtcagattgag
agagatgctaatgttgtgcaggccatggagagagagcggaaacaagaccgagatctggtg
gaatctttagagagaaagatcaaatctcaagatcgcatcatcgcactgaaggatgtcgcc
ttagctgagcaagatctaagaattcagtctctggagatggcatcttacgatggtgtactg
gtttggaaaatctctgacttcaatcgtaaaagaaatgatgccttatctggtcgcactaca
tccatctactcaccgtgcttcttcaccagtcgtcatggttacaagatgtgtgcccgagta
tatctgaatggagatggaatgggcaagggaaaccatgtctccctgttctttgtcatcatg
agaggcacatttgatgggttgctgagatggccattcagacaaaaggtaacattcatgctt
ttggatcaaaacaaccgagaacatgtcattgatgcatttcgtccggaccctacatcaaat
tccttcaagcgtcctactggcgatatgaatattgccagcggctgccctttattcatgcct
ctgtctcaactggagagcagtcgtcatgcttacgtaaaagacgactctatgtttatcaag
gtgatcgtagacactacagatttaaattaa
DBGET
integrated database retrieval system
