KEGG   Serpula lacrymans: SERLADRAFT_348456Help
Entry
SERLADRAFT_348456 CDS       T03135                                 

Definition
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
sla  Serpula lacrymans
Pathway
sla03030  DNA replication
sla03410  Base excision repair
sla03420  Nucleotide excision repair
sla03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SERLADRAFT_348456
   03410 Base excision repair
    SERLADRAFT_348456
   03420 Nucleotide excision repair
    SERLADRAFT_348456
   03430 Mismatch repair
    SERLADRAFT_348456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sla03032]
    SERLADRAFT_348456
   03400 DNA repair and recombination proteins [BR:sla03400]
    SERLADRAFT_348456
Enzymes [BR:sla01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SERLADRAFT_348456
    6.5.1.6  DNA ligase (ATP or NAD+)
     SERLADRAFT_348456
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     SERLADRAFT_348456
DNA replication proteins [BR:sla03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    SERLADRAFT_348456
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     SERLADRAFT_348456
DNA repair and recombination proteins [BR:sla03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SERLADRAFT_348456
   NER (nucleotide excision repair)
    Other NER factors
     SERLADRAFT_348456
   MMR (mismatch exicision repair)
    Other MMR factors
     SERLADRAFT_348456
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID: 18809175
NCBI-ProteinID: XP_007317510
JGI: 348456
UniProt: F8NVH9
LinkDB All DBs
Position
Unknown
AA seq 799 aa AA seqDB search
MKQFTEVIDIDSLPTTRDTTTSFETINQPGPSASRLSPFAQSNNIASSSPSYIAPRSEFF
NSAISNDGPSGTPYRPLSIDTLVYAIHEEPWPANTAAPYAFIAHTLVTLSETRSRIVIIN
TLTNCLRTLLRYNPSSLLPALYLLSNTLSPPYSPIELGIGSSVISKAIQHVSGLTPAALK
RLYNASGDPGDVAFEAKSNLRTLVPHPPLCITAVYDSLIKIANVKGQGANKQKQTIVEKL
LVAAKGEEVRFLVRTLSMNLRVGAVRTSILTALSRAMVLTPPSNMSTPLSIDSSYYTNPN
LLAAVKPLSTDSKRKVADESRDRVLAKFSLAESLVKKVFVQHPNYDHIVAGLFEGGLDGL
AERVPLTIGIPLHPTLGSPTRSLDEIYDRLGDLSFTAEFKYDGQRAQIHGSKDKDGQVFV
RIFSRHLEDMTSKYPDIVSLVKCVFASSPDLQCFIMDAEIVAIDPAHGSLKSFQELSNRA
RKDVNIQDVKVAVCVFAFDLMLLNGEILLERPFRERRSLLRVNFPPQIPKEQGAARLDQV
DSFDSEEGRGHVEDFWMKAVESRCEGLMIKLLDSGEVPEEFSLQKDKVKKKPLPATYEPD
KRTSAWLKLKKDYVLSIGDSLDLVPIGAWHGNGRKAGWWSPILLAVRESTTGDLVAVCKC
MSGFSDVFYREMKSRFPEDSDTCSRLPQWECITGGFDPDVYFKPREVWEIRGADVTLSPV
SLAAMGLVSQTRGLSLRFPRFIRVRDDKSIEHASTSEFLADMWRGQQGKVKDDQACGADD
GELVDVDLDDEVEEEAEDT
NT seq 2400 nt NT seq  +upstreamnt  +downstreamnt
atgaagcaattcacagaggtcattgatattgattcgctaccaaccacccgcgacacaact
acttcttttgaaacaattaatcaacctggaccctcggcctctcgcctttctccttttgct
caatccaataatattgcgtccagttcgccttcgtacattgcgccaaggtcggaatttttt
aactctgccatctcgaacgatggacctagcgggacgccctacaggcctttatctatagac
acacttgtctatgctatacatgaagaaccctggcccgcaaacactgccgcaccctatgca
tttatcgcacacactcttgtgacgctctccgagacgcgctctcgtatagttatcatcaac
accctgacaaattgcctccgtacgctattacgctataacccctcatccctacttccagca
ctctatctcctctctaacactttatcgccgccctattcacctatcgaacttggaataggt
agttctgtcatctcaaaggctatccagcatgtctctgggctaactcctgccgccctcaaa
aggctatataatgcctcaggtgaccctggagatgtcgcttttgaggccaagtccaatttg
cgtactttggtcccgcatcctccgctttgtatcacggccgtatatgactcacttataaag
atcgcaaatgtcaagggacagggtgccaataaacagaagcaaactatagtggaaaaactg
cttgtcgcagccaaaggagaagaagtcagatttcttgttcggacattatcaatgaatctt
cgtgttggggctgttagaacatcaattcttacggccctttccagagctatggttttgaca
ccgccctccaatatgtctacgcccttatccatagattcatcctattacacaaaccctaac
cttctcgccgcagtgaaaccactttccacggacagcaagagaaaggttgctgatgaatct
agggaccgggtgcttgcgaagttctcacttgcagagagtttagtcaagaaagtatttgta
caacacccaaattatgatcacatagttgctggtctttttgagggcggtttagatgggttg
gccgaacgtgttccgcttaccatagggattcctctgcacccgactttgggttctcccact
cgatctctggatgagatatacgatcgtctcggcgatttatcattcaccgctgaatttaag
tatgatggacagcgtgcccaaatccatggttccaaagataaggacgggcaagtcttcgtt
cgcattttttctcgtcacttagaagatatgacgagtaagtaccccgacattgtatccttg
gtgaagtgtgttttcgcctcttcgccggatctacaatgttttatcatggatgcggagata
gttgctattgatcccgctcatggtagccttaagtcatttcaagagttgtcaaacagagcc
cgaaaagatgtcaatatacaagatgttaaagttgctgtgtgcgtattcgcatttgatctt
atgcttttgaatggcgagatacttcttgaacgcccctttcgtgagcggcgttccctactg
cgagttaactttcctccccaaattcctaaggaacagggagccgctcgtctggaccaagtc
gacagttttgacagcgaggagggtcggggtcatgttgaggacttttggatgaaagcggta
gaaagtcggtgtgaaggtttgatgattaaattacttgacagcggggaagttccggaggag
ttttcgctgcaaaaggacaaagttaaaaagaaacccctaccagccacatatgaacctgat
aaacgcacttctgcatggttgaagctcaaaaaggattatgtgctaagtataggagacagt
cttgatctcgtccctataggcgcatggcatggtaatggtcgtaaggctggctggtggagt
ccaattttgttagcagtacgggaatcgactacaggagatcttgttgctgtgtgtaaatgc
atgtctggattttctgatgttttctacagagaaatgaagtcgagattcccagaagattca
gatacgtgttcacggctgccgcagtgggaatgcatcaccggaggcttcgatccagatgtc
tacttcaaacctcgggaagtgtgggagatacgtggtgcagatgttacattgagtcctgtt
tccttggctgcgatgggcttggtatcccagactaggggcctaagccttcgattccccaga
tttatcagggtcagggatgacaagtcgatagagcatgcgagtacatcggaatttctcgcg
gacatgtggagaggtcagcaaggtaaagtaaaagatgatcaagcatgcggtgccgatgac
ggggaacttgtggatgtggacttggatgatgaggtggaagaggaagcggaagatacataa

DBGET integrated database retrieval system