Sulfurimicrobium lacus skT11: SKTS_09000
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Entry
SKTS_09000 CDS
T06796
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
slac
Sulfurimicrobium lacus skT11
Pathway
slac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SKTS_09000 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slac03019
]
SKTS_09000 (recQ)
03400 DNA repair and recombination proteins [BR:
slac03400
]
SKTS_09000 (recQ)
Enzymes [BR:
slac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SKTS_09000 (recQ)
Messenger RNA biogenesis [BR:
slac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SKTS_09000 (recQ)
DNA repair and recombination proteins [BR:
slac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SKTS_09000 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCB26014
UniProt:
A0A6F8V8M7
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All DBs
Position
906363..908210
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AA seq
615 aa
AA seq
DB search
MAAMPNSSAQQILHDIFGYSSFRDEQQAIVEHVATGGDALVLMPTGGGKSLCYQIPSLLR
RGVGIVVSPLIALMQDQVDALRQLGVRAAFYNSSLSAEAAREVFIALVRGELDMLYVAPE
RLLLANFLNTLEQVQDGPGLALFAIDEAHCVSQWGHDFRPEYRALTVLHERFPEVPRIAL
TATADAPTRREIVERLNLENARQFVSSFDRPNIRYRVTHKANARQQLQAFLEAEHPDDAG
IVYCLSRKKVEETAAWLKEKGWDALPYHAGLAAATRNANQKRFLREEGVIMVATVAFGMG
IDKPNVRFVAHLDLPKSMEGYYQETGRAGRDGLPANAWMTYGLGDVVSMRQMLDSGDAPE
ERKRVERQKLDALLGFCESTACRHQTLLRYFGEEHPGACAQCDNCLEPVDTWEATEAARM
ALSCVYRTGQRFGVVHLIDVLLGKANAKVEQFNHQQLSTFGIGQSLNQAQWSSVFRQLVA
GGLLEADMETYGGLRLTEDARPVLRGEQDVWLRRDAEPAKRKVSKAERGARAREAFAGAS
EDPLWLALKAKRTALAREQGVPPYVIFHDSTLLEILNRRPGSLTEMGQISGVGQAKLERY
GDAFLQVLEDANGVS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatgccaaattcctccgcccagcaaatcctgcacgacattttcggctactcg
tccttccgcgacgagcagcaggccatcgtcgagcatgtcgcgacgggcggcgacgcgctg
gtgctgatgcccaccggcggcggcaagtccttgtgctaccagattccttccctgttgcgg
cgcggcgtcggcatcgtggtgtcgccgctgatcgcgctgatgcaggaccaggtggatgcc
ttgcgccagctcggcgtcagggctgcgttttataattccagtctttctgccgaagcggcg
cgcgaagtgttcatcgcgctggtgcgcggcgagctcgacatgctttacgttgcgccggag
cggttgctgctggcgaacttcctcaacactttggaacaggtgcaggacgggccgggactg
gcgctgttcgccatcgacgaggcgcattgcgtgtcgcagtggggccacgacttccgcccc
gagtaccgtgccctgacggtattgcacgagcgcttccccgaagtgccgcgcatcgccctc
accgccacggcggacgcgcccacgcggcgcgagatagtggagcgcctcaacctcgaaaac
gcgcgccagttcgtctccagcttcgaccgtcccaacatccgctaccgcgtgacgcacaag
gccaacgcacgccagcagttgcaggccttcctcgaagccgagcaccccgacgatgccggc
atcgtctactgcctgtcgcgcaagaaagtcgaggaaaccgcggcctggctcaaggaaaaa
ggctgggacgcgctgccctaccacgccgggctggccgccgccacgcgcaacgcgaatcag
aaaagattcctgcgcgaggagggcgtgatcatggtggccacggtggccttcggcatgggc
atcgacaagcccaacgtgcgcttcgtcgcccacctcgacctgcccaagagcatggaaggc
tactaccaggaaaccggccgcgccgggcgcgacggcctgcccgccaacgcctggatgacc
tacggcctgggcgacgtggtctcgatgcgccagatgctcgattccggcgatgcccccgag
gagcgcaagcgggtggagcgccagaagctcgacgccctgctgggcttctgcgaatccacc
gcctgccgccaccagaccctcctgcgctacttcggcgaggagcatcccggtgcctgcgcc
cagtgcgacaactgcctcgaaccggtggatacctgggaagccaccgaagccgcgcggatg
gcgctctcctgcgtctaccgcaccggccagcgcttcggcgtggtgcacctgatcgacgtg
ctgctgggcaaggcaaacgcaaaagtcgaacaattcaaccatcagcagctcagtactttc
ggcatcggccagtcgctcaaccaggcacagtggagcagcgtgttccgccagctggttgcg
ggcggcctgctggaagccgacatggaaacctacggcggcctgcgtttgactgaagacgcc
cgcccggtgctgcgcggcgagcaggatgtctggctgcggcgcgacgccgaacccgccaag
cgcaaggtcagcaaggccgaacgcggcgcccgtgcccgcgaagctttcgccggcgccagc
gaagacccgctatggctggccctcaaagccaagcgcactgcactcgcccgcgaacagggc
gtgccgccctacgtcatcttccacgacagcaccctgctggaaatccttaaccgccggcct
ggcagcctcaccgagatgggacagatcagcggggtggggcaggccaagctggagcgttat
ggggatgcgtttttgcaggtgctggaggatgcgaacggggtgagttaa
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