Seriola lalandi dorsalis (Yellowtail amberjack): 111644374
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Entry
111644374 CDS
T06058
Symbol
tmc3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slal02000
]
111644374 (tmc3)
03037 Cilium and associated proteins [BR:
slal03037
]
111644374 (tmc3)
Transporters [BR:
slal02000
]
Other transporters
Pores ion channels [TC:
1
]
111644374 (tmc3)
Cilium and associated proteins [BR:
slal03037
]
Other cilia and associated proteins
Stereociliary proteins
111644374 (tmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
111644374
NCBI-ProteinID:
XP_023249012
Ensembl:
ENSSLDG00000011343
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MSTVSEPWVGSSRSLSAAKRHKSIRKNSRRIYSAFQDHQQGSSDDEDKEDERVDSNDPEE
MFQNIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLKYEGRLTRTRGYQTAGADLLKKL
SRLLYNVVVLFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELL
AGAPFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGRVRKIGSAGYRLPLA
YFLVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAESKG
AAIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQ
VKPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYS
LIIALLDKVNSMSSAVPVSTGNWSDFSSFLATISQPEVDSSVSTLVSEISVSEHRNSTIA
TIATVLEVTNSSRSSSVSNQTALFERNTRSQQDQCWETYVGQEMLKLSIIDMIFTVASIL
LIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAF
NVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYRP
SQHCGPFSGQEKIYDIISETVANDFPLWFSKVMSYITSPVVVLPALLLLFMLIYYLQAIA
RSLKFTNNQLRMQLQTERTDDKKKVFQMAAARLQVTEAAVDKKLDQQESDITSQEASVHT
PSPRRNGSVTNFQSPVRRGNSIRTITRSASRADLNRGSAAGSVRSPTVTILPKHRLDHIP
NRPPPFLSGPSGTCRSKSYHHMAYNPPARYSDNIHSDPLYRKTIRSIHPVEAAGFIAAQN
YGGRRGQTTRYVIVNEHEPRKKLLRSATRIPRHYLMEEPAEILELYPCNVKRYTPRTTHH
HQPHPHRSHPSQQHLSEEEEEEEEGKGRRRVSLGKAHRPRSLSDLHQPAHFYIGDRLESH
VSMAKDSHAARGRYGAQEEDGEEDGEGEIDWGDLESHAQSQASVRGTDPLLVRTRHHIHS
PGRYCQSPARTRHMESYVKPKTRPKLETPLTESDSASLASSSDQQNSSTDQYIQVIHNKE
RYLKSDAKQEKLAKKKSKTSFDLNVTESNDLVCSNV
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagtgtctgagccttgggtcggcagcagcaggtctctgtctgcagccaagaga
cataagagtatcaggaagaactccaggaggatttattcagccttccaggaccaccagcag
ggctcctcagatgatgaagataaagaggatgagcgggtggacagcaatgacccggaggaa
atgttccagaacattcagtaccagaaagagatcatcgccaacattcggaccagaccctgg
ccaatgagacgcaagctcaaagttcttaagcaggccagagagattgttctgaagtatgag
ggccgactaaccagaaccagaggctaccagaccgcaggagctgatctgctgaagaaactc
tcccgtttgctttacaacgtcgtggttctgttcattccctgggaagtgaggatcaaaaag
atcgaaagtcactttgggtcgggagtagcctcctacttcatcttcctgcgctggttgttt
gggatcaacatcgtcctcaccatcatgactggagccttcattgtcctgccagagctgctg
gctggagctccgtttggaacgacgaggagtaaaactatccccaaggagcatctggcttca
gcgcaggacctggacaccatctggtctcttgggggctacctgcagtactctgtgttattc
tatggctactatggcagggtgaggaagattggcagcgccgggtaccgtttgcctctcgcc
tacttcctggttgggatggcggtctttgcctacagtttcatcatcctgttaagaaaaatg
gccaagaactcccgtctgagtctggccagcgcctctgatgagaacttcacgttctgctgg
agggttttctgtgcctgggattatctgataggaaacccagaagctgcagagagcaaggga
gccgccatcgtcaacaacatcagggaagccattgtcgaggagcaggaaaagaagaaggat
accagtttggcagttctgatcagtctgcgtatcttagccaacatcctggtgctgctgtct
ctggccggcagcatctacatcatctactttgtggtggaccgttctcagaaactggagcag
gtgaagccagagctgacgctgtgggagaagaatgaggtgagtgtggtggtttctctcatc
accatgattgctccgtctgcctttgagctggtagctcagctggagatgtaccacccgcga
acctcgctgcgatttcagctggccagagtgcttgttttatacctggggaatctctacagc
ctcatcattgccctccttgataaggtcaatagtatgagctctgctgtcccagtgagtaca
ggtaactggtctgacttcagctcgttcctggccaccatctctcagcctgaggtagactcc
agcgtctccaccctggtgtctgagatctctgtctctgaacatcgcaacagcaccatagca
accattgctacagtgctagaagtcaccaacagcagcaggagcagctccgtctccaaccag
acggctctgtttgagaggaacacacgctctcagcaggaccagtgctgggagacctacgtc
ggacaggagatgctgaagctgtccatcattgacatgatcttcacagtggccagcattctg
ctcattgacttcatcagaggtttggtggttcgctacctgagtgactgctgctgctgggat
ttagagagcaaatttcctgaatatggagaattcaaaatagctgagaatgtcttgcatctg
atttataaccaaggaatgatctggatgggagcgtttttctccccctgtcttcctgccttc
aacgtgttgaagctgattggtctgatgtatctgaggagctgggccgtcctcacctgtaac
gttcctcatcagcaggtgttcagagcatccagatcaaacaatttctacctggccatgctg
ctgttcatgctgtttctgtgtatgctgcccaccatctttgccatagtcaggtacagaccg
tcccagcactgtggaccattcagtggccaagagaagatctatgacatcatctctgagaca
gtggccaatgacttccccctgtggttcagtaaagtgatgagttacattaccagccctgtt
gtagtgctgccagcactgctgctgctgttcatgctgatatactatctccaggccattgcc
agatccctcaaattcaccaacaaccagctgaggatgcaactccagactgagcggactgac
gacaagaagaaagtcttccagatggctgcagcaagattacaggttacagaggctgcggtg
gacaaaaagctggatcagcaggagagcgacatcacgagccaggaggcctctgtccacact
ccatctcctcgacggaacggcagtgtcacaaactttcagtctcccgttcgtcgtggaaac
agcatccgcaccatcacccgatcggcatccagggcggacctgaacagaggaagtgcggct
ggatctgtcagaagtccaacagtgaccatactgcccaaacaccggctggaccatatacct
aacaggcccccaccatttcttagtggccctagtggaacctgcaggtccaagtcctaccat
cacatggcgtacaatcccccagctcgctattctgacaacatccactctgaccccctgtac
aggaagaccatacgctccatacaccccgtcgaagctgctgggttcatcgctgcacagaac
tatggaggacggcgtggtcaaactactcgctacgtgattgtcaatgagcatgagcccagg
aagaagctgctgcgctcagccactcggatcccacgccattacctcatggaggagcctgca
gagatcctggagctgtacccatgcaatgtcaaacgctacacaccccgcaccactcaccac
caccaaccgcatcctcaccggtcccacccatcacagcagcatctgagtgaagaggaagag
gaggaagaagaaggaaaaggcaggagaagggtgtcactagggaaggctcatcggccccgt
tccctctctgatctccatcaaccagcacacttctacatcggtgaccgtttagaaagccac
gtgtccatggcgaaagacagccatgcagctcgaggaagatatggagcacaggaagaggat
ggagaggaggatggtgaaggagaaatagactggggggatttggaatcacatgcccagtcc
caggccagtgtgagaggaacagatcctcttcttgtgcgaaccaggcatcacatccattcc
ccaggaagatactgtcagtccccagctaggaccaggcacatggaatcttatgtgaagccc
aagacgagaccgaagctggagacccctctgaccgagtcagactcggcctccctggcctcc
agcagtgaccaacagaacagtagcactgaccagtacattcaggttatccacaataaggag
cgttatctcaagtctgatgcgaagcaagaaaagctggccaaaaagaagtcaaaaaccagc
tttgatctaaatgtcactgagtcaaatgacctggtctgttccaatgtatga
DBGET
integrated database retrieval system
