Seriola lalandi dorsalis (Yellowtail amberjack): 111647918
Help
Entry
111647918 CDS
T06058
Definition
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04010
MAPK signaling pathway
slal04141
Protein processing in endoplasmic reticulum
slal04210
Apoptosis
slal04217
Necroptosis
slal04621
NOD-like receptor signaling pathway
slal04622
RIG-I-like receptor signaling pathway
slal04920
Adipocytokine signaling pathway
slal05132
Salmonella infection
slal05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111647918
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111647918
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111647918
04217 Necroptosis
111647918
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111647918
04622 RIG-I-like receptor signaling pathway
111647918
09152 Endocrine system
04920 Adipocytokine signaling pathway
111647918
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111647918
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111647918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111647918
04121 Ubiquitin system [BR:
slal04121
]
111647918
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111647918
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111647918
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
111647918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF_BIRC3_bd
zf-TRAF
zf-C3HC4
zf-RING_4
zf_C2HC_14
zf-C3HC4_2
zf-C3HC4_4
MATH
zf-RING_6
zf-C3HC4_3
Sina
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
111647918
NCBI-ProteinID:
XP_023253383
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MAAQEPSPPSSLEGNKPGFPKKILANNLEDKHLCNSCQKILRRPLQAQCGHRFCSFCFNK
IVSSGPQKCSACIKEDLFEEPTSILKQGGAFPDNAARREVEALAAVCPNEGCTWTGTIKE
FEAGHEGNCDFMIILCPSCKELMRANEQERHNERECPERTLNCKYCKEPFLLKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFKAPCRFHVVGCDTSVEKEKIHDHERQCS
YEHLNLLLHFIMGIKVSLESLQPQSLEVASHKLQELHQSLRDLEQKMSQLGGGGGAAPVQ
GACAPTLATSFTPLPSAMGAALELQLQSEKTKVAELSRRCQELELKVSTFENIVCVLNRE
MERSCTTMEAYNRQHRLDQDKIEILNNKVRQLERTVSLRDLSIVEMEGKMREMSAATYDG
IFVWKISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFV
VMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLF
CSLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaggaaccgtctccaccatcttccctggaaggcaacaaaccgggtttccct
aagaaaattttggccaacaacctcgaagacaagcatctgtgcaattcatgccagaagata
ctgagaaggcccctgcaggcccagtgtggtcaccgcttttgttcgttctgtttcaacaaa
attgtgagctccggaccacagaaatgcagtgcctgcatcaaagaagacttatttgaggaa
cccacctctattctcaaacaaggtggtgctttcccagacaatgcagctcggcgagaagta
gaggccttggcggctgtctgtcccaacgagggatgtacgtggacggggactatcaaagaa
tttgaggccggccatgagggcaactgtgacttcatgatcatcctgtgtccttcctgtaaa
gagctgatgagagccaacgagcaggaacgccacaacgagagagagtgtccagagaggacg
ctcaactgcaaatactgcaaagaacccttcttactgaagaacatcaaggctcatgatgaa
atctgtccaaagtacccaatgatttgtgaaggttgtgcaaagaaaaagatccccagagaa
aagtatgtggaccatattaagttctgcagtaaatttaaagcaccatgcagatttcatgtt
gttggctgcgatacgtctgtggagaaagagaagattcatgaccatgagcgccagtgttcc
tacgaacacctcaacctgctcctgcatttcatcatgggcatcaaggtgagcctggaaagc
ctgcagccccagagcctggaggtcgccagccacaagctgcaggagctccaccagtccctc
agggacctggagcagaagatgagccagctgggtggaggggggggtgcagctcctgtgcag
ggtgcgtgcgccccgaccctggccacctccttcaccccgctgcccagcgccatgggcgcc
gccctggagttacagctccagagtgaaaagaccaaagtggcggagctgagccggcgctgc
caggagctggagctcaaagtgagcacgttcgagaacatcgtgtgcgtcctcaaccgagag
atggagcgttcctgcaccaccatggaggcctacaaccgccaacaccgactggaccaggac
aagatcgagatcctcaacaacaaggttcgtcagctggagaggacggtgagtctcagagac
ctgtccatcgtggagatggaggggaaaatgagggagatgtctgcggccacgtacgacggc
atctttgtctggaagatctcagatttcaccaagaagagacaggacgccgtggccggccgt
gcccccgctatgttctctcctgccttttataccagtaaatacggctacaagatgtgcctg
cggatctacctgaacggcgatgggaccggccgcggcacccacctgtctctgttctttgtg
gtgatgagaggacacagcgacgcactcctcaagtggccttttaatcagaaggtcacccta
atgctgcttgaccagaacaacagggagcacataatcgacgccttccggcccgacatctcc
tcctcgtccttccagaggcccgtcagtgatatgaacatcgccagcggctgtccactcttc
tgttcgctctccaaactggactctaaaaactcctacatacgagatgacaccatattcatc
aaggccatcgtagacctcactggactctag
Seriola lalandi dorsalis (Yellowtail amberjack): 111664872
Help
Entry
111664872 CDS
T06058
Definition
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04010
MAPK signaling pathway
slal04141
Protein processing in endoplasmic reticulum
slal04210
Apoptosis
slal04217
Necroptosis
slal04621
NOD-like receptor signaling pathway
slal04622
RIG-I-like receptor signaling pathway
slal04920
Adipocytokine signaling pathway
slal05132
Salmonella infection
slal05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111664872
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111664872
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111664872
04217 Necroptosis
111664872
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111664872
04622 RIG-I-like receptor signaling pathway
111664872
09152 Endocrine system
04920 Adipocytokine signaling pathway
111664872
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111664872
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111664872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111664872
04121 Ubiquitin system [BR:
slal04121
]
111664872
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111664872
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111664872
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
111664872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF_BIRC3_bd
zf-TRAF
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-RING_6
ATG16
Tropomyosin_1
Paramyxo_NS_C
Noelin-1
Motif
Other DBs
NCBI-GeneID:
111664872
NCBI-ProteinID:
XP_023275438
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MARISLDCPSSLPGIPLSVLSVPMENKYKCQQCLQVLRRPVQAQCGHRFCVHCFKQLTSS
GPKPCEACRQEEIYEEPISILNSNEAFPDNAAGREIASLPARCLNQGCDWTGSIKEYEAQ
HEGRCEFERIQCDACQTLILRTEKDRHNERECEARTLNCKYCKMTFNFKDIKAHDEICLK
FPLHCKECGKKKIPREKFNDHSRTCPRSKSACPFSEVGCKSVIENGKLSDHEHSSTMEHL
RLLLPMVMSVARARTEAPGPGEWQEDSGLSLYRAPEEGDVMGAGAAASAQSVDLEKKVNA
LENIVCVLNREVERSSVTLEAFSHQHRLDQEKIENLSNKVRQLERTLTMRDLQLSETEQL
LQELQFCTYDGIFVWKITEFSRRRQDAVAGRTPAMFSPAFYSSKYGYKMCLRLYLNGDGT
GRGTHLSLFFVVMRGKYDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPIS
EMNIASGCPLFCPLAKLAGKSPYLRDDTIFIKAIVDLTGL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaatctcgttggactgtcccagctctttaccagggatccccctcagtgtgctg
tcagtgcccatggagaataaatacaaatgtcagcagtgtctccaggtcctgaggaggcct
gtccaggctcagtgcggccaccgcttctgtgtacactgcttcaagcaactcaccagctct
ggcccaaagccttgtgaagcctgccgccaagaggaaatatatgaggagcctatttccatt
ctgaatagtaatgaggcatttccagacaatgcagcaggtcgagaaattgcaagtctgcca
gccaggtgtttgaaccagggctgcgattggacaggctcaataaaagagtatgaggctcag
catgaaggtcgctgtgagtttgagcggatacagtgcgacgcctgccaaaccttgatcctt
cgtacagagaaggatcgacataatgagagagaatgtgaggcaagaacgctcaactgcaaa
tactgcaaaatgaccttcaactttaaagacatcaaggcccacgatgaaatctgcctgaag
tttcccttacattgcaaggagtgtggcaagaagaagatcccaagagaaaagttcaatgat
cacagcagaacctgtcccaggtcaaagagcgcctgtccattcagtgaagtgggctgcaaa
tctgtgatagagaacgggaagctcagtgaccatgagcacagcagcaccatggagcacttg
cgtctgctgctgcccatggtgatgtcagtggctcgggcacgtacagaggctcctggtccc
ggggagtggcaggaggactctggtctgagcctgtacagggctcctgaggagggagacgtt
atgggcgccggagctgcagcctctgcacagtctgtggatctggaaaaaaaggtgaacgct
ttagaaaacatcgtgtgtgtcctgaatcgggaagtggagcgcagttcagtaacattggag
gctttctcacatcaacatcgtttagaccaagaaaagattgaaaatctgtccaacaaagta
cgacagctagagagaacgctgactatgagagacttgcagctgtctgagaccgaacagctg
ctccaagaactccagttctgcacttacgatggaatatttgtctggaagattactgaattc
tctcgccgcagacaggatgctgtggctggtcgaacacctgcaatgttctcacctgcattt
tactccagcaaatatggctacaaaatgtgtctgaggctgtatttgaacggtgatggaacc
ggtcgaggaacacacctttcactgttctttgttgtcatgaggggcaagtatgacgctctg
ctcaaatggccattcagtcagaaggtgactctaatgcttttggatcagaacaacagggag
cacattatcgatgctttccgccctgatgtcacctccacctccttccaacggccaatcagt
gagatgaacatcgccagtggctgcccgctgttctgtccactggctaaactggctggcaag
agcccctatctgagagatgacacaatcttcattaaagccattgtagacctcaccggctta
taa
Seriola lalandi dorsalis (Yellowtail amberjack): 111666015
Help
Entry
111666015 CDS
T06058
Definition
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04010
MAPK signaling pathway
slal04141
Protein processing in endoplasmic reticulum
slal04210
Apoptosis
slal04217
Necroptosis
slal04621
NOD-like receptor signaling pathway
slal04622
RIG-I-like receptor signaling pathway
slal04920
Adipocytokine signaling pathway
slal05132
Salmonella infection
slal05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111666015
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111666015
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111666015
04217 Necroptosis
111666015
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111666015
04622 RIG-I-like receptor signaling pathway
111666015
09152 Endocrine system
04920 Adipocytokine signaling pathway
111666015
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111666015
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111666015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111666015
04121 Ubiquitin system [BR:
slal04121
]
111666015
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111666015
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111666015
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
111666015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF_BIRC3_bd
zf-TRAF
SlyX
zf-C3HC4_2
zf-C3HC4
zf-RING_6
zf_C2HC_14
zf-C3HC4_4
ATG16
MATH
Tropomyosin_1
Motif
Other DBs
NCBI-GeneID:
111666015
NCBI-ProteinID:
XP_023276969
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MATQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNR
TVSSGPQKCNACIKEDIFEDPTSILKQGCAFPDNAVRREVENLSAVCVNESCTWKGSIKE
YELNHEGKCEFMIIPCPSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKEKIHDHERAYA
YEHLNLLLHYIMGMKVSMEGLQPQGLELAGHKLVELQQSLRELEARVSQLSTTSSGPPVQ
GAAAASSSSSSSGPPGPPTSAPLPPPPTLAPTLSVSTSFTPLPSSVGAALELQLHSEKTK
VAELGRRCTELEVKAGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVRQL
ERTVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFAKKRQDAIAGRAPAMFSPAFYTS
KYGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNREHII
DAFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVDLTGL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaggaaccgtcccctccctcgtccatggagagcaataaacccggcttcccc
aagaagatcctgggcaacaagctggaggacaagcacctgtgcaactgctgccacaacata
ctgagacgaccatttcaagcccagtgtggacatcgcttctgttcctactgcttcaacagg
acagtgagtagcggaccccagaaatgcaacgcctgcattaaagaggatatttttgaggat
cccacgtcgattctgaaacaaggatgtgcttttcctgacaacgcagttcggagggaagtt
gaaaacctgtcagctgtttgcgtcaatgaaagttgcacttggaaaggcagcattaaagag
tacgagctgaaccacgaggggaagtgcgagttcatgatcatcccctgcccctcctgcaaa
gaacgaattcgcttcaacgaacaggagcgccacaacgagcgcgagtgcccggagagaacg
ctcaactgcaagtactgcaaggagccgtttcacttcaaaaacatcaaggcgcatgatgag
atctgtcccaagtacccgatgatctgtgaaggctgcgccaagaagaaaatacccagagag
aagtatgtggaccacattaagttctgcagcaaattcagaactccgtgtcgatttcatgtc
gtgggatgtgacatgtctgtggagaaggaaaagattcatgaccatgagcgcgcctacgcc
tacgagcacctgaacctgctgctgcactacatcatgggcatgaaagtgagcatggagggc
ctgcagccccagggactggaactggccggacacaaactggtggaactgcaacagtccctc
agggagctcgaggccagagtctcccagctcagcaccacctcctctgggcctcccgtgcag
ggagccgccgccgcctcctcctcatcctccagctccggcccccccggtcctcctacatca
gcccctctccctccgcctcccactctggctcccactctctccgtgtctacctccttcacg
cctttgcccagctcggtgggagcggcgctggagctccagctccacagcgaaaagaccaag
gtggccgagctgggccgcaggtgcaccgaactggaagtcaaagccggcacgttcgaaaat
gtggtgtgtgtcctgaaccgagaggtggagaggttcgccaccaccatggaggccagcaac
cgtcagcataaactggaccaggacaagatcgaggcgctgagtaacaaggtgcgacagctg
gagaggacggtggggctgaaggacctgacggtggctgagatggagggccggctgagggaa
atgtccgccactacctttgacggcgtctttgtctggaggatctctgatttcgccaagaag
agacaggacgccatcgcaggtcgagcccccgccatgttctcaccagccttctacaccagt
aagtacggctataagatgtgtctgcggatctatctgaacggagatgggacggggcgcggc
agccacttgtccttgttctttgtggtgatgaggggactgagcgacgccctgctcaaatgg
cccttcaaccagaaggtgactctgatgctgctggaccagagcaacagggagcacatcatc
gacgcctttcgacccgacgtcacttcctcctccttccagaggcccgtgagcgagatgaac
atcgccagcggctgtccgctcttctgcccgctctccaagctcgacgccaaaaactcttac
atccgcgacgacaccatcttcatcaaggcgatcgtggacctcaccggcctctag
DBGET
integrated database retrieval system
