Seriola lalandi dorsalis (Yellowtail amberjack): 111653554
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Entry
111653554 CDS
T06058
Symbol
ncan
Name
(RefSeq) neurocan core protein
KO
K06794
neurocan core protein
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
slal00535
]
111653554 (ncan)
00536 Glycosaminoglycan binding proteins [BR:
slal00536
]
111653554 (ncan)
04091 Lectins [BR:
slal04091
]
111653554 (ncan)
Proteoglycans [BR:
slal00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
111653554 (ncan)
Glycosaminoglycan binding proteins [BR:
slal00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
111653554 (ncan)
Lectins [BR:
slal04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
111653554 (ncan)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
V-set
EGF
hEGF
Ig_3
I-set
Motif
Other DBs
NCBI-GeneID:
111653554
NCBI-ProteinID:
XP_023259926
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MGAVEYVKCSRMQGVLPVCGLQPLLALLLLQTACCGVTNADTVVNMRKVTHQTISEELSK
TVLLPCLFTLRPSASSSHEPPRIKWTKVWGQRGSDGLQKEQSVLVAKDNVVKVKKAFQGR
VTLPGYNINRYNASLALTGLRSSDSGLYRCEVVVGINDEQDTVPLEVTGVVFHYRAPHDR
YALSFADAKRVCVENSAVIATPGQLQATFADGYDNCDAGWLSDQTVRYPIQSPRPGCYGD
REESPGVRNYGNRSPDELFDVYCFTKQLQGEVFHSAVPEKLSLATASTHCHSLGAQLVTV
GQLYLAWQAGLDQCDPGWLADGSVRYPINVPRKNCGGDEPGVRTVYNNPNRTGFPDTTAL
FDAYCYRAHHPAEVQAAEAQALHQTNINPAAQATSSVTETQQSAVFPQTSTWTGLVDLDK
AGVHSIAAISNSSEISEEHIVIHLKPEEGWKEGQDGPRTSQPSQEENDGPKSGNTLGLFD
LESLESHGGSAHEEEDGSYYGSDSPTLSSIASSTPQPQTGNSVLAEFVNTLMRPFRYWAG
GEEGEKELSVPEEKAGENQTQSEASSRNLSIPKASRNKGSMDNAIMEHRSGSFSFRAPTS
GLQSPVEGLSEREKEVMPLIRLVPAVHSTGKIDTSTQPAEQASSTSADNPLSTVNEFTAS
SPDERSSPSDHVNISGPQGPRGGPAFAPAPSSQFRWAVKSMHGAKLGPPGNVAYVGKRPT
WEPMEAKAGPLEVMTLPTSLRQDNPENYSGEGKDQDGEDTTTTPSATTTTPGEEKGIEGS
GEGSNFPSGFVKVHNLDSSGVKPSPQTESSLSRSELVTATEQTTLSQWQLVEQPTTPPQD
PQEPDTAEEAKGEILYVRRPTDNLSSVSSRRGEGSSNSGFTPVYRKHSKGTSREEMVTST
PEALMEVLTTSEVTTPEPLTTRDTQRTDPTTTATSAENPSTEEPSISISWVQEEKESAPN
RQEDQTTPAPSAGSQTIAGVIQLTTLASDSIVGATEMESRSAVSESFVVGSRWTPSKGVS
QKPEEHKAGETTDNKDTNNPFGILVPNWAFGLIPSVENNPCQTNPCLHGGSCLQEGDGYS
CYCPQGFSGESCEI
NT seq
3283 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagttgagtatgtcaagtgcagcaggatgcagggcgtactgcctgtgtgtgga
ctgcagcccctgctggccctccttctgcttcagactgcatgctgtggcgtaaccaatgca
gacactgtggtgaatatgcggaaagtgacccatcagaccataagtgaggagctgtccaaa
accgttcttctcccctgccttttcaccctccgccccagtgccagttcatcccatgagccc
ccgaggattaagtggaccaaggtctggggccaaagaggctcagatggcctgcagaaggaa
cagtcggttctggtggccaaagacaatgtggtcaaggtgaagaaggccttccagggtcgc
gtaacgctgcctggctacaacatcaaccgctacaatgccagtcttgcgctgaccgggctt
cgttccagtgactctggtctgtaccgctgtgaggttgtggtgggcatcaatgacgagcag
gacacagttcccctggaggtcacaggtgtggtatttcactaccgggcccctcatgaccgc
tacgccctgtcctttgctgacgccaagagggtgtgtgtggagaattcagcagtcatcgca
acgccaggccagctgcaggctaccttcgctgatggctatgacaactgtgatgctggctgg
ctgtccgaccagactgtccggtatcccattcagtcgcctcggcctggttgctatggagat
cgcgaggagtcacctggagtccgtaactacggcaataggtcccctgatgagctgtttgat
gtttactgttttaccaagcagcttcaaggcgaggtcttccactccgcagtcccggagaag
ctaagtctggccacagcctccacccactgccactcccttggagcccagctggttacggtc
gggcagctctacctcgcctggcaggccggccttgaccagtgtgatccaggctggctggcg
gacggcagcgtccgctaccccatcaacgtcccgcggaagaactgtggcggagacgagccc
ggagtgcgcacagtctacaacaaccccaaccgcacgggcttccctgacaccacagccctg
ttcgatgcctactgctaccgagcccaccacccagcagaggtccaggctgcagaggcccag
gctttacaccagaccaacatcaaccccgcagcacaggccacctcctcagtcactgaaacc
cagcagagtgctgtttttcctcagacctccacctggactggcctggtcgacttggacaaa
gccggagtgcactcaattgctgcaatcagcaactcctctgagatatctgaggagcacata
gtcatccacttaaagcctgaggaaggttggaaagaagggcaggatggccctagaaccagc
caacccagccaggaggagaatgatggccctaagagcggcaacactttgggcctttttgat
cttgagagcctggaaagtcatggaggttctgcccatgaggaagaagatggcagctattat
ggatctgattccccaacattatcatccatagcttcttcaactccccagccgcagacgggt
aacagtgtcttggctgagtttgtgaacactcttatgagaccctttagatactgggctgga
ggtgaggaaggtgaaaaggaactttcagtgcctgaggaaaaagcaggagagaaccagaca
cagagtgaagcatccagcagaaacctgagtatacccaaagccagcagaaacaagggcagc
atggacaacgccatcatggagcacaggagtggtagtttttccttcagggctcctaccagt
ggactacagagtccagtggaaggtctgtctgagcgggagaaagaggtgatgccattgatt
cgattagtgcctgcagtccatagcacagggaaaatcgacaccagcacccagccagcagaa
caagcctccagcacatctgctgacaaccctctgtccactgttaacgaattcactgcatca
agtcctgatgagagatcgtctcccagtgaccatgtcaacatatctggtcctcagggtccc
agaggaggcccagcctttgctcctgcccccagcagccagtttcggtgggccgtcaagtcc
atgcatggcgctaaactaggcccccctggaaatgtggcctatgtgggtaaacgtcccacc
tgggagcccatggaagccaaagcagggccccttgaggtgatgactctgcccacctccctg
cgacaggacaacccagaaaattattcaggcgaaggaaaagaccaggacggagaagacact
accacaactccatcagcgactacaactacaccaggggaggagaaggggatagaggggagt
ggagaggggagcaactttcctagtgggtttgtgaaagtccataacttggacagcagtggt
gtcaaaccgagtcctcaaacagagtcttcactcagccgaagtgagcttgtgactgcgact
gagcagactactctgtcccagtggcagctagtggaacagcccaccaccccacctcaggac
ccccaggagcctgacacagcagaagaggccaagggagagatcctctacgtccgccggcct
actgataacctctcctctgtctcctcacgcaggggagagggtagctcaaattcaggattt
actcctgtttatcggaaacacagcaaaggaacaagcagagaggaaatggtgacttccaca
cccgaagccttgatggaggttctgacgacctctgaggtgaccacaccggagcctctgacg
accagagacacacagaggacagatcctaccaccacagcaaccagcgcagaaaatccctcc
acagaggagccatctatttccatttcatgggttcaggaggaaaaagaaagtgcacccaac
cggcaggaggatcaaactactccagcacccagtgcgggatctcaaacgattgcaggggtc
attcagttgaccacccttgcgtctgactccatagttggcgccacagaaatggaatccagg
tctgcagtgtccgaatccttcgtggtgggaagtcggtggacaccttccaaaggtgtgagc
caaaaaccagaggaacacaaagccggggagacgacagacaacaaagacacaaacaaccct
tttggcattctcgtacccaactgggcctttggtctcatcccatcagtggagaataaccct
tgccagaccaacccctgtctccacggagggagctgcctgcaggaaggtgacggctatagc
tgctactgtcctcagggcttctccggggagagctgcgagatcg
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