Seriola lalandi dorsalis (Yellowtail amberjack): 111663961
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Entry
111663961 CDS
T06058
Symbol
dhx33
Name
(RefSeq) putative ATP-dependent RNA helicase DHX33
KO
K17820
ATP-dependent RNA helicase DHX33 [EC:
5.6.2.6
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111663961 (dhx33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slal03009
]
111663961 (dhx33)
Enzymes [BR:
slal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111663961 (dhx33)
Ribosome biogenesis [BR:
slal03009
]
Eukaryotic type
Other ribosome biogenesis factors
111663961 (dhx33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
T2SSE
AAA_19
AAA_assoc_C
nSTAND3
Motif
Other DBs
NCBI-GeneID:
111663961
NCBI-ProteinID:
XP_023274145
Ensembl:
ENSSLDG00000020132
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MPYDPAPPPAKKFKPGSVFFRLDKNKPGMLLPRKGNATTPIEVQRKQLPIYQAKPQLLNQ
LRQLHSAILIGETGSGKTTQIPQYLYEAGIGRQGIVAITQPRRVAAISLAGRVAEEKRTQ
LGKLVGYTVRFEDVTSHETKLKFMTDGMLLREAIGDPLLLRYTVVVLDEAHERTVHTDVL
FGVVKTAQRRRRELNKIPLKVIVMSATMDVDLFSEYFNKAPVLYLEGRQHPIQIYYTKQP
QSDYLQAALVSVFQIHQEAPPSHDILVFMTGQEEIEALARTCRDIAKHLPDGCGPMVVIP
LYASLPPAQQLRVFQPAPKGSRKVILSTNIAETSVTISGIKYIIDTGMVKAKRFNPDSGL
EVLAVQRVSKAQAWQRAGRAGREDSGSCYRLYTEQEFDNLIPMTVPEIQRCNLAGVMLQL
MALGIPDVMNFDFMSRPSPEAVRSAVDHLELLGAVERKEGQVFLTALGKKMASFPLEPRY
AKTILLSPDYSCSEEILSIVSLLSVDTVLYNPPARREEVLAARKKFSSSEGDHMTLLNIY
RAFKKVGGNKEWCRENFVNSRNMGLVKEVQAQLKEICLKLNLKLESCGAETGNVRRCLAH
GMFVNAAELQPDGSYLALHTHQPVAIHPSSVLFQAKPAYVVFNELLHTSRCYMRDLCLVD
ADWLLDAAPEYFGRKLHPTKS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccctacgaccccgcccctcctccggctaaaaaattcaagccggggtcagtttttttc
cgtctcgataagaataaacctggaatgctgctgcctagaaagggaaatgcaaccactccg
atagaagtccagaggaagcagcttccaatctaccaggcgaaacctcagctgctgaaccaa
ctgaggcagctgcacagtgctattctcattggtgagactggctctgggaagaccactcag
atcccacagtatctgtatgaggccggcatcggacgacagggcatcgttgccatcactcag
ccccgtcgggtcgctgccatctcactggcaggaagggtggcagaggagaagaggactcag
cttggcaagctggttggttacacggtgcgtttcgaggatgtcacctcacacgagacgaag
ctgaagttcatgacagatggcatgctgctgcgcgaggccatcggagaccccttactgctg
cgctacaccgtggtggtcttggatgaggctcatgagcgcaccgtgcacaccgatgtgctg
ttcggcgtggttaagacagctcaacgcaggcgcagagaacttaataagattcccctgaag
gtcatagtgatgtcagccacgatggatgtagatttgttctctgagtacttcaacaaggca
cctgtactgtacctggaggggaggcagcatcccattcagatctactacaccaagcagccc
cagtcagactacctgcaggctgcactcgtgtctgtgttccagatccatcaggaggctcct
ccgtcccatgatatcttagtcttcatgacgggtcaggaggaaatcgaggctctggcgaga
acgtgtcgggacatcgccaagcatctgcctgacggctgcggtcccatggtagttatccct
ttgtacgcgtcgctgcccccagcacagcaactcagggtcttccagccggctcccaagggc
agtaggaaggttatcctctccaccaacattgctgagacgtcagttacaatctctgggatc
aaatatatcatagacacagggatggtgaaggccaaacgtttcaatcctgacagcgggttg
gaggtgttggcagtgcagcgggtttctaaagcgcaggcgtggcagcgagcgggccgggcc
ggcagggaggactctggctcctgctaccgtctctacaccgagcaggagtttgacaacctc
atccccatgactgtgcctgagatccagaggtgtaacttagccggcgtgatgctgcagtta
atggctctagggattccagatgtgatgaattttgatttcatgtccaggccctctccagag
gccgttcgttctgctgtggaccatttagagctgctgggagccgtggagaggaaggagggt
caggttttcctcaccgctctgggaaagaagatggcaagcttccctctggagccgcgatat
gccaagaccatcctgttgtccccggattattcctgttctgaggagattttgagcatcgtg
tctctgctgtcagtggacaccgtgctgtacaaccctccagcccggcgggaagaggtgctc
gcagcgcgcaagaagttcagctccagcgaaggagaccacatgacgctcctcaacatttac
agagcgttcaagaaagtcggtggtaataaggagtggtgtcgggagaactttgtcaacagc
aggaacatgggtctggtgaaagaggtccaggcgcaactcaaagaaatctgccttaagctg
aatttgaagctggagtcctgcggggcagagacaggaaatgttcgccgctgccttgcccac
gggatgttcgtcaatgctgcggagctacaacccgacggcagctacttagctctgcacacc
caccagcctgtggccatccacccctcctctgtccttttccaggccaagccggcgtacgtg
gtcttcaacgagctgctgcacacctcccgctgctacatgagagacctctgtttggtggat
gccgactggctgctggatgcagcaccagagtactttggccgcaaactccacccaaccaag
agctaa
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integrated database retrieval system