Streptomyces lydicus 103: SL103_05355
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Entry
SL103_05355 CDS
T04699
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
slc
Streptomyces lydicus 103
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slc03019
]
SL103_05355
03009 Ribosome biogenesis [BR:
slc03009
]
SL103_05355
Messenger RNA biogenesis [BR:
slc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SL103_05355
Ribosome biogenesis [BR:
slc03009
]
Eukaryotic type
Pre-60S particles
RNases
SL103_05355
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AOP45743
UniProt:
A0A1D7VG56
LinkDB
All DBs
Position
complement(1231982..1232617)
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AA seq
211 aa
AA seq
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MNDRMVWIDCEMTGLSLANDALIEVAALVTDSELNVLGDGVDVVIRPPAEALGTMPEVVR
QMHTASGLLAELDGGTTLEAAEAQVLAYIKEHVPEPGKAPLCGNSVGTDRGFLLRDMPTL
ESYLHYRIVDVSSVKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAVFVPQ
PGPDSDTAKAIAAKHVLPAEPQPAPQSAPSS
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggactctcgctggcgaacgac
gcgctcatcgaggtggccgcactggtcaccgactcggagctgaatgtgctgggcgacggg
gtggatgtggtgatccgccctccggccgaggcactcggcaccatgccggaggtggtgcgc
cagatgcacaccgcctccgggctgctggcggagctggacggcggtacgacgctggaggcg
gccgaggcgcaggtgctcgcctatatcaaggagcacgtgccggagccggggaaggcgccg
ctgtgcggcaattccgtcggcaccgatcgcggtttcctgctgcgcgacatgccgacgctg
gagagctacctccactaccggatcgtcgatgtctcgtccgtgaaggaactggcccggcgc
tggtacccgcgggcctacttcaacagtccggagaagaacggcaaccaccgggcgctggcg
gacatccgtgaatccatcgcggagctccgctactaccgggaggcggtcttcgtgccgcag
cccggccccgactcggacaccgcgaaggccatcgccgccaagcacgtcctgccggccgaa
ccgcagccggcgccgcagtccgcaccgtcctcgtga
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