Streptomyces lydicus A02: T261_4147
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Entry
T261_4147 CDS
T03756
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
sld
Streptomyces lydicus A02
Pathway
sld03030
DNA replication
sld03430
Mismatch repair
sld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T261_4147
03430 Mismatch repair
T261_4147
03440 Homologous recombination
T261_4147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sld03032
]
T261_4147
03400 DNA repair and recombination proteins [BR:
sld03400
]
T261_4147
Enzymes [BR:
sld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T261_4147
DNA replication proteins [BR:
sld03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T261_4147
DNA repair and recombination proteins [BR:
sld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T261_4147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
AJT65804
LinkDB
All DBs
Position
4435973..4437103
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AA seq
376 aa
AA seq
DB search
MKIRVERDVLAEAVAWAAKSLPARPPVPVLAGLLLKAEDGALSLSGFDYEVSARVSVEAE
VEEEGTVLVSGRLLADICRALPNRPVEISTDGVRVTVVCGSSRFTLHTLPVEEYPSLPTM
PTATGTVPGEVFAAAAAQVAIAAGRDDTLPVLTGVRIEIEGDTVTLASTDRYRFAVREFL
WKPESPDASAVALVPAKTLLDTAKSLSSGDTVTLALSGSGAGEGLIGFEGAGRRTTTRLL
EGDLPKYRTLFPTEFNSVAVIETAPFVEAVKRVALVAERNTPVRLSFEQGVLILEAGSSD
DAQAVERVDAELDGDDISIAFNPGFLLEGLSAIDSPVAQLSFTTSTKPALLSGRPAKDAE
ADDAYKYLIMPVRLSG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatccgggtggagcgcgatgtactcgcggaggcagtggcctgggccgccaagagc
ctcccggcccgtccgccggtgcccgtcctcgcgggcctgctgctgaaggcggaggacggc
gctctgagcctctccggcttcgactacgaggtctcggcgcgggtctcggtggaggccgag
gtcgaggaggagggcacggtcctcgtctccggccggctgctcgccgacatctgccgggcg
ctccccaaccgcccggtggagatttccaccgacggtgtacgagtgaccgtcgtctgcggc
tcgtcccgcttcaccctccacaccctgcctgtggaggagtacccgtccctgccgacgatg
cccaccgccaccggcaccgtccccggcgaggtcttcgcagcggccgccgcccaggtggcc
atcgccgccggccgtgacgacaccctcccggtgctcaccggcgtacgcatcgagatcgag
ggcgacaccgtcaccctggcctccaccgaccgctaccgcttcgcggtccgcgagttcctg
tggaagccggagagcccggacgcctccgcggtcgccctggtgcccgccaagaccctgctg
gacaccgccaagtcgctgagcagcggcgacaccgtcacgctggcgctgtccggctcgggt
gcgggcgagggcctgatcggtttcgagggcgccgggcgccgtacgacgacgcggctgctg
gaaggcgacctgccgaagtaccgcacgctcttccccaccgagttcaactcggtcgccgtg
atcgagaccgcgcccttcgtcgaggccgtcaagcgtgtggcgctggtggccgagcggaac
accccggtgcggctgagcttcgagcagggcgtgctgatcctggaggccggctccagcgac
gatgcacaggctgtggaaagggtggacgccgagctggacggcgacgacatctcgatcgcc
ttcaaccccggcttcctcctggagggcctgtctgccatcgactccccggtggcgcagctg
tcgttcacgacgtccaccaagcccgccctgctgagcggccgtcccgccaaggacgccgag
gcggacgacgcgtacaagtacctgatcatgccggtgcggctgagcggctga
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