Sulfurovum lithotrophicum: YH65_05780
Help
Entry
YH65_05780 CDS
T03877
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
slh
Sulfurovum lithotrophicum
Brite
KEGG Orthology (KO) [BR:
slh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slh03016
]
YH65_05780
Enzymes [BR:
slh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
YH65_05780
Transfer RNA biogenesis [BR:
slh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YH65_05780
Prokaryotic type
YH65_05780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AKF24953
UniProt:
A0A7U4M140
LinkDB
All DBs
Position
complement(1176721..1177788)
Genome browser
AA seq
355 aa
AA seq
DB search
MKLVYPLNIKNDFVFNSTPRDFTVEEIPLYEFTGEGEHLVLKVRKKEMTTWEMLDAISNH
VGIRRRDMGYAGLKDKHAMTIQYISLPAKFEEKLDAFSHEKIKILDKVRHNNKIRVGHLK
GNRFEIRLKKVLGVQKDKLDSVLKWIKSHGVPNYFGNQRFGTDGNNWEDGKKLIEGKLKI
RDRKTREFLMGSYQSYLFNSWLCRRMELTLLLQEFSEADTEKLMKLPEGSLKGSKEQKNF
FKLVEGDLMMHYPYGRLFEVEELSKEAERFETKDIAPTGLIPGTRVKRSAATARMLEEHF
DEEIKMNGARRYAWIQVTEIKKNYVEEKAHYELSFVLPKGAYATNVLDVLRGNAS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgtctaccctctcaatattaagaacgactttgtcttcaattctactccgcgt
gattttactgttgaagagatacctctgtacgaattcacaggggagggtgagcatttggta
ctcaaagtacgaaaaaaagagatgactacctgggaaatgctcgatgcaatctccaaccat
gtcggcatcagaagacgtgatatgggctatgctggtttgaaagacaagcatgccatgacc
attcagtacatctccctgccggcgaagttcgaagagaaactggatgctttcagccatgag
aagatcaagatactcgataaagtacgtcataacaataagatacgtgtagggcacctcaaa
ggtaaccgtttcgagatacgtttgaaaaaagtgctcggtgtgcagaaggataaactggat
tctgtgctgaaatggatcaagagtcatggggtaccgaactatttcggcaaccagcgcttc
ggtacggacggaaacaactgggaagacgggaaaaagctgatcgaagggaaactgaagatc
cgcgacagaaagaccagagagttcctgatgggatcgtatcagagttatcttttcaacagt
tggctctgcagacgaatggagcttacactattgctacaggagttcagcgaagcagatacg
gagaaactgatgaagctgcctgagggttcactcaaaggtagcaaagaacaaaaaaacttt
tttaaacttgtagaaggtgacctgatgatgcactacccgtacggcaggctttttgaagtg
gaagagctcagcaaagaggcagaacggtttgaaacaaaagatatcgcgcctacaggcctc
atacccggtacaagggtaaaaaggtccgctgcaaccgcaagaatgctggaagaacacttt
gatgaagagatcaaaatgaacggggcaagacgctatgcctggatacaggtaacggagatc
aagaagaactatgtggaagagaaagcccattatgaactctcttttgtgcttccaaaaggt
gcgtatgccacgaatgtactggatgtgctcagaggtaacgcttcctga
DBGET
integrated database retrieval system
