Sulfurovum lithotrophicum: YH65_08825
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Entry
YH65_08825 CDS
T03877
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
slh
Sulfurovum lithotrophicum
Pathway
slh00260
Glycine, serine and threonine metabolism
slh00460
Cyanoamino acid metabolism
slh00630
Glyoxylate and dicarboxylate metabolism
slh00670
One carbon pool by folate
slh00680
Methane metabolism
slh01100
Metabolic pathways
slh01110
Biosynthesis of secondary metabolites
slh01120
Microbial metabolism in diverse environments
slh01200
Carbon metabolism
slh01230
Biosynthesis of amino acids
slh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
slh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
YH65_08825 (glyA)
09102 Energy metabolism
00680 Methane metabolism
YH65_08825 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YH65_08825 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
YH65_08825 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
YH65_08825 (glyA)
Enzymes [BR:
slh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
YH65_08825 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
DUF5768
Motif
Other DBs
NCBI-ProteinID:
AKF25465
UniProt:
A0A7U4M245
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Position
1796063..1797313
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AA seq
416 aa
AA seq
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MSYAIETFDPEIFQAIENELERQTNHLEMIASENFTIPAVMEAMGSVFTNKYAEGYPYKR
YYGGCEYADVVEQLAIDRACELFDCNYANVQPHSGSQANGAVYAALIKAGDKILGMDLSH
GGHLTHGSKPSFSGKNYHSFTYGVELDGRINYDRVMEIAKIVQPKIIVCGASAYAREIDF
KKFREIADEVGAILFADIAHIAGLVCAGEHPSPFPYADVVTTTTHKTLAGPRGGMIMTND
EDIAKKINSAIFPGLQGGPLVHVIAAKAVGFKHNLSDEWKVYAKQVKANANKLAEVLVAR
GYDVVSGGTDNHLVLVSFLDKEFSGKDADAALGAAGITVNKNTVPGETRSPFVTSGIRIG
SPALTSRGMKEAEFEIIANKIADVLDNVNDSELHAKIKEEMKELASNFVIYDKPIY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgccatagaaacgtttgaccctgagatcttccaggcgatcgaaaatgaacta
gagagacagacgaaccaccttgagatgatcgcatcagagaacttcaccattcctgctgtc
atggaagcaatgggttctgtatttaccaacaaatatgcagagggttacccgtacaagaga
tattacggcggatgcgaatatgccgatgtggtagaacagcttgctatcgacagggcctgc
gaactctttgactgcaactatgcaaatgtacagccccactccggctcacaggcgaacggt
gccgtctatgcggcgctgatcaaagccggggacaaaatacttggtatggacctcagccac
ggcggtcacctcactcacggctcaaaacccagtttttccggtaaaaactaccacagcttt
acctacggtgtcgagcttgacgggcgtatcaactatgacagagtcatggagattgcaaag
atcgtacaaccgaagatcatcgtctgcggcgcttccgcctatgccagagagatcgacttc
aagaagttcagggagatcgccgatgaagtaggcgcgatcctctttgcggacatcgcgcac
atcgcgggccttgtctgtgccggtgagcacccaagccccttcccgtatgccgacgtggtc
acgacaacgacacacaaaacacttgcaggacctcgtggcggtatgatcatgaccaacgat
gaagacattgccaagaagatcaactctgccatcttcccgggtctccagggcggaccgctt
gttcatgtaatcgctgccaaagcagtcggtttcaagcacaacctttctgatgaatggaaa
gtctatgcaaaacaggtaaaagccaatgccaacaagctggctgaagtactggtagccaga
ggttacgacgtcgtttccggcggaacagacaaccaccttgtgcttgtctccttcctcgat
aaagaattctcagggaaagatgctgatgcggcactcggagctgcgggtatcactgtgaac
aagaacacggttccgggagagacaagaagcccgttcgtgacttcaggtatccgtatcggt
tcgcctgcattgacaagccgtggtatgaaagaagcggagtttgagatcatcgccaacaag
atcgctgatgtactcgacaatgtcaacgacagcgaactgcatgcaaagatcaaagaggaa
atgaaggaacttgcttccaacttcgtgatctacgataagccgatctactaa
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