Spirosoma linguale: Slin_3894
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Entry
Slin_3894 CDS
T01156
Name
(GenBank) coagulation factor 5/8 type domain-containing protein
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
sli
Spirosoma linguale
Pathway
sli00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Slin_3894
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sli04147
]
Slin_3894
Enzymes [BR:
sli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
Slin_3894
Exosome [BR:
sli04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Slin_3894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
F5_F8_type_C
CHB_HEX_C_1
Fn3_assoc
GHL6
XRCC1_N
Ig_2
Motif
Other DBs
NCBI-GeneID:
8727652
NCBI-ProteinID:
ADB39884
UniProt:
D2QHT5
LinkDB
All DBs
Position
complement(4671964..4674030)
Genome browser
AA seq
688 aa
AA seq
DB search
MRRLTLLAAFVSFSLLSIAQTPAPYGAVPSPRQLAWHKLKYYAFVHFNMNTFTNEEWGHG
TETPDMFNPTQLDCRQWAKVAKEAGMEGIVITAKHHDGFCLWPSKYTEHSVKNSKWRNGK
GDVLKDLSEACKEYGLKFGVYLSPWDRNHPAYGTPEYNEVFKKTLQEVLTQYGDVFEVWF
DGANGEGPNGKKQVYDWPGFIETVRKYQPNAVIFSDAGPDIRWVGNEDGYAGETNWSTLN
RDKVYPAYPNYWELTLGHEDGTHWVPTEVNCSIRPGWYYHASEDNKEKSLEHLVDIYYSS
IGRNGNWLLNLPVDRRGLVHENDVKQLMALKAYTDKATHNLAGGKKITSNSVFSKASTFA
AGNVLDASRDTYWAAAEGAKQATLDIDLGKPTTLNRLLIEEYIALGQRVKKFSVAAWQKD
GYQTIASGTTIGNRRILRFPTVTTTKIRVSIDESKASPLIRHIEMYNAPELIVTPVISRN
KEGMVTIVCPKTTDPVITYTTDGSEPTAQSKRFTQAVALPQGGVIKARAFVDNMKKASSP
VTAEFDISSAKWTVVSTGDAVPKKEAVRLIDGNADSFWQQRKQAESPTSVVLDLGEELPL
KGFTYLPRQDGKKAGIVYRYAVSVSQDGKTWSAPVSQGAFNNINNNPVGQAVRFDKPQTA
RFLKFDALETTEASDATVSIAELGVLTR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgactcacacttcttgccgctttcgtcagtttttctcttttatcgatagctcag
acaccagccccgtacggtgccgttccatcgccccgccagcttgcctggcataagctcaag
tactatgccttcgtccatttcaatatgaacaccttcaccaatgaagagtggggacacggc
accgaaacccccgatatgtttaaccccactcaactcgactgtcggcagtgggcgaaggtg
gcaaaagaagccgggatggaagggattgtcattacggccaagcaccacgacggcttctgt
ctgtggccgtcgaaatacacggagcactcggtcaaaaacagcaaatggcggaacgggaag
ggcgatgtgctgaaggatctgtcggaagcctgtaaggagtacggtctgaagttcggcgtg
tacctgtccccctgggaccgcaatcacccggcctacgggacgccggaatacaacgaggtg
ttcaagaaaacccttcaggaagtgctgacccagtacggcgatgtgtttgaggtctggttc
gacggcgcaaacggagaagggccaaacggcaaaaaacaggtctacgactggcccggcttt
atcgaaaccgtacgcaaataccagcccaacgccgttatcttcagcgatgccggtcccgac
attcggtgggtaggcaacgaagatgggtacgcgggcgaaaccaactggagcacgctcaac
cgcgataaggtctacccggcttatccaaactactgggagttgacgctgggtcacgaggac
ggtacgcattgggtgcctacggaggtaaactgctccatccggccgggctggtattaccac
gccagcgaagacaacaaagagaagtcgctggaacacctggtcgatatttattacagctcc
atcggccgcaacggcaactggctcctgaacttgcccgtcgatcggcgtgggctggtgcat
gaaaacgacgtaaaacagctcatggcgctgaaagcctacaccgacaaggctacgcacaac
ctcgccggagggaagaaaatcacgagcaacagtgtgttcagcaaggcttcgacctttgcc
gccggtaacgtgctcgatgctagccgggatacctactgggccgctgccgaaggcgccaaa
caggcgacgctggatattgacctgggcaagcctacaaccctcaaccggctgctgattgaa
gagtatattgcgttgggccagcgggtaaagaagttctcggtagccgcctggcagaaagat
ggctaccagaccattgccagcggaacgaccattgggaaccggcggattctgcgattcccg
accgttacgaccaccaaaattcgggtgagcatcgacgagtcgaaagccagtccgctgatt
cggcatatcgagatgtacaacgcgcccgaactgatcgtaacgcccgtgatcagccggaat
aaagagggtatggttacgattgtctgccccaaaacgaccgacccggtcattacctacacc
accgacggctcggaaccgaccgcccagagtaagcgctttacccaggccgttgctttgccg
cagggcggggttataaaagcccgcgcctttgtcgataacatgaaaaaagcgagcagcccc
gtaacggccgaattcgacattagttcggcgaaatggacggttgtgtcgaccggcgacgca
gtacccaaaaaagaagctgtccggctaatcgacggcaacgcggactcgttctggcagcaa
cgtaaacaggccgaaagtccaacatcggtggtgctggatttgggcgaggagctgccgctg
aaaggcttcacgtacctgccgcgtcaggatgggaaaaaggcgggtatcgtgtaccgatat
gccgtttccgtaagccaggatgggaaaacatggtcggcaccggtaagtcagggagcgttc
aacaacatcaataataaccccgttgggcaagccgtccgcttcgacaaaccacaaacggcc
cggttcctgaagttcgacgccctcgaaacaaccgaggccagcgacgccaccgtatccatt
gccgaactgggtgtactgacccgctga
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