Sulfuricaulis limicola: SCL_0554
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Entry
SCL_0554 CDS
T05241
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
slim
Sulfuricaulis limicola
Pathway
slim00470
D-Amino acid metabolism
slim00550
Peptidoglycan biosynthesis
slim01100
Metabolic pathways
slim01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCL_0554
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCL_0554
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SCL_0554
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slim01011
]
SCL_0554
Enzymes [BR:
slim01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SCL_0554
Peptidoglycan biosynthesis and degradation proteins [BR:
slim01011
]
Precursor biosynthesis
Amino acid ligase
SCL_0554
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
RimK
GARS_A
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
BAV32876
UniProt:
A0A1B4XDJ8
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All DBs
Position
542514..543431
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AA seq
305 aa
AA seq
DB search
MSRNFGKVAVLMGGPSAEREVSLKSGNAVLAALKRKGVDAHGFDADKSTLRQLEDGKFER
VFIVLHGRWGEDGVIQGALEVLDIPYTGSGVLGSALGMDKLRTKYLWSAAGIPTPEYAVL
EAGTDFDKVAAKLGLPVFVKPVREGSSLGVSKARTVAELKAAWKSAAKYDDQVIAERFID
GAEITCGILGDQALPLIRIETDREFYDYEAKYILDTTRYLCPCGLPADQERAIQALAQRA
FAALGCSGWGRVDFMLDKDGRAYALEVNTVPGMTDHSLVPKAAQQAGMNFDELVLKILET
ADVER
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaaatttcggcaaggtggcggtattgatgggcggcccttccgccgagcgcgag
gtgtcgctcaagagcggcaatgccgtgctcgcggccctgaagcgcaagggggtcgatgcg
catggcttcgacgccgataaatccaccctgcgccagctggaagacgggaaattcgaacgc
gtgttcatcgtgctgcacggacgctggggcgaggacggcgtgatccagggcgcgctcgaa
gtgctcgacattccctataccggcagcggcgtgctcggctcggcgctcggcatggacaag
ctcagaaccaaatatctctggtccgccgccggcattccgacgccggaatacgccgtgctg
gaagccgggaccgatttcgacaaggtcgctgcaaaacttggtctgccggtgttcgtgaaa
ccggtgcgtgaaggatcgagcctcggcgtgagcaaggccaggacggtggccgaactgaag
gcggcctggaagagcgcggccaaatacgacgatcaggtcatcgccgagcgcttcatcgac
ggcgccgagatcacctgcgggattctcggcgatcaggccttgccgctgatcaggatcgag
accgatcgggaattctacgactacgaagcgaagtacatcctcgataccacgcgctatctc
tgcccctgcggcctgcccgcggaccaggagcgcgccatccaggcgctggcgcaacgcgca
ttcgccgcgctcggttgcagcggctggggccgggtggatttcatgctcgacaaggacggg
cgcgcgtacgcgctcgaggtcaacacggtaccgggcatgacggatcacagcctggtgccc
aaggcggcgcagcaggcgggcatgaatttcgatgaactggttttgaaaatactggagacg
gcggatgtcgagcgctga
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