KEGG   Shewanella litorisediminis: JQC75_00110
Entry
JQC75_00110       CDS       T07182                                 
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
  KO
K01825  3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
slit  Shewanella litorisediminis
Pathway
slit00071  Fatty acid degradation
slit00280  Valine, leucine and isoleucine degradation
slit00310  Lysine degradation
slit00362  Benzoate degradation
slit00380  Tryptophan metabolism
slit00410  beta-Alanine metabolism
slit00640  Propanoate metabolism
slit00650  Butanoate metabolism
slit00907  Pinene, camphor and geraniol degradation
slit00930  Caprolactam degradation
slit01100  Metabolic pathways
slit01110  Biosynthesis of secondary metabolites
slit01120  Microbial metabolism in diverse environments
slit01200  Carbon metabolism
slit01212  Fatty acid metabolism
Module
slit_M00087  beta-Oxidation
Brite
KEGG Orthology (KO) [BR:slit00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00640 Propanoate metabolism
    JQC75_00110 (fadB)
   00650 Butanoate metabolism
    JQC75_00110 (fadB)
  09103 Lipid metabolism
   00071 Fatty acid degradation
    JQC75_00110 (fadB)
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    JQC75_00110 (fadB)
   00310 Lysine degradation
    JQC75_00110 (fadB)
   00380 Tryptophan metabolism
    JQC75_00110 (fadB)
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    JQC75_00110 (fadB)
  09109 Metabolism of terpenoids and polyketides
   00907 Pinene, camphor and geraniol degradation
    JQC75_00110 (fadB)
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    JQC75_00110 (fadB)
   00930 Caprolactam degradation
    JQC75_00110 (fadB)
Enzymes [BR:slit01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     JQC75_00110 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     JQC75_00110 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     JQC75_00110 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  Delta3-Delta2-enoyl-CoA isomerase
     JQC75_00110 (fadB)
SSDB
Motif
Pfam: 3HCDH_N ECH_1 3HCDH ECH_2 NAD_binding_2
Other DBs
NCBI-ProteinID: QRH01894
LinkDB
Position
complement(25166..27316)
AA seq 716 aa
MIYQSPTIQVELTDDKIARLCFNAPGSVNKFDRETLASLNAALDVLKDSDAKAAVLTSGK
DTFIVGADITEFLALFAEEDAKLMEWIAQANVVFNKLEDLPFPTVSAIKGFALGGGCEAI
LATDFRVADTSAKIGLPETKLGLIPGFGGTVRLPRLIGADNALEWITTGKDQRPEDALKV
GAIDAVVAPENLEAAAIQMLKDALAGKLDWQARRARKQAPVTLPKLEAMMSFTTAKGMVY
AVAGKHYPAPMAAVSVVEQAAGMSRAEALIVEHNAFIKLAKTDVATALIGIFLNDQLVKG
KAKKAAKLAKDIKQAAVLGAGIMGGGIAYQSASKGTPIVMKDITQAALDLGLNEAAKLLS
AQVERGRSTPDKMAKVLNNITPALDYAPIKDVNVVVEAVVENPKVKAMVLAEVENMVADD
AIIASNTSTISIDLLAKSLKNPARFCGMHFFNPVHKMPLVEVIRGKDTSEETVASVVAYA
SKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYLL
DVVGLDTGHHAQAVMAEGFPDRMGKSGKDAIDVMYEAGRLGQKNSKGFYQYSIDKRGKPK
KEVVADSYDLLKSAFGELKSFDADEIIARTMIPMIIETVRCLEEGIVASPAEADMGLVYG
LGFPPFRGGVFRYLDTLGVANFVALADKYAHLGGLYQVTDAMRELASNNGSYYPKA
NT seq 2151 nt   +upstreamnt  +downstreamnt
atgatctaccaaagtcctacaatccaggtcgaactgaccgatgacaagattgcccggctg
tgtttcaacgctcccggctcggtcaacaagttcgatcgtgaaaccctcgcctccctcaat
gccgcactcgatgttctcaaagactctgatgccaaggccgctgtactgacctccgggaaa
gacacctttattgttggcgccgatatcactgagtttttagccctcttcgctgaagaagac
gccaaattgatggagtggatagcccaggccaacgtagtattcaacaagctggaagacttg
cctttcccaaccgtgtcggccatcaagggcttcgccctgggcggcggctgtgaagcgatt
ctggccaccgatttccgtgttgccgacaccagcgccaagataggcctgccagaaaccaaa
ctcggtcttatccccggttttggcggtaccgtacgcctgccacgcctgattggtgccgac
aacgcactggagtggatcaccacaggtaaagatcagcgccctgaagatgcgctcaaagtg
ggtgccattgatgcggtagtcgccccggaaaatctggaagctgctgccattcagatgctc
aaagacgccctcgccggtaagctcgactggcaagctcgccgcgcccgcaaacaggcgcca
gtgacactgcccaagctcgaagccatgatgtctttcaccaccgccaaaggtatggtgtat
gccgttgccggcaaacactaccctgcgcccatggccgccgtgtctgtggttgaacaagct
gccggcatgagccgtgccgaggccttgatagtagagcacaatgcctttatcaagctggcc
aaaaccgacgttgccactgcgctcatcggcattttcctcaacgatcagctggtaaaaggc
aaggccaaaaaggctgccaaactggccaaggatatcaagcaagccgcggtgcttggcgcc
ggtatcatgggtggcggtatcgcctaccaaagtgccagcaagggcacccctatcgtcatg
aaagacatcactcaggccgcgctggatctgggtctgaatgaggccgccaagctgttgtcc
gctcaggttgagcgaggccgctctaccccagacaagatggccaaggtgctgaataacatc
acaccggcgctggactatgcccccatcaaagacgtaaacgtggtggtggaagccgtggtg
gaaaatcccaaggttaaggccatggtgctggcagaggtcgaaaacatggtggcagacgat
gccattatcgcctccaacacgtccaccatctccatcgatttactggcgaaaagcctgaaa
aatccggctcgcttctgcggtatgcacttctttaacccggtacataagatgccgctggtt
gaggtcattcgcggtaaagacaccagcgaagaaaccgttgcttctgttgtggcttatgcc
agcaagatgggtaagacccctattgtggtaaacgactgcccaggcttcttcgttaaccgt
gtgctcttcccgtattttgccggcttcaatggtctgctggcagaaggtggcgacttcgca
gccatcgataaagtgatggaaaagcaatttggctggccaatgggccctgcctacctgctg
gatgtggtgggtctggatacgggtcaccacgcccaggccgtaatggccgaaggattcccg
gaccgcatgggcaagtcaggtaaagacgctatcgatgtgatgtacgaagccggtcgtctc
ggtcagaagaacagtaagggcttctaccagtacagcatcgacaagcgcggcaagccgaaa
aaagaagtcgtggcagactcctacgacctgctcaagtctgcttttggtgagctgaagagc
tttgatgccgatgaaatcatcgcccgcaccatgatccccatgatcatcgaaacggtacgc
tgccttgaagaaggcatagttgccagccctgcagaagccgatatgggtctggtctatggc
cttggcttccctccattccgtggcggtgtgttccgctatctggatacgctgggtgttgcc
aacttcgtggcgcttgccgataaatatgcccatctgggcggcctgtatcaggtgaccgac
gccatgcgcgaacttgccagtaacaatggcagctactatccaaaggcctga

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