Shewanella litorisediminis: JQC75_00110
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Entry
JQC75_00110 CDS
T07182
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
slit
Shewanella litorisediminis
Pathway
slit00071
Fatty acid degradation
slit00280
Valine, leucine and isoleucine degradation
slit00310
Lysine degradation
slit00362
Benzoate degradation
slit00380
Tryptophan metabolism
slit00410
beta-Alanine metabolism
slit00640
Propanoate metabolism
slit00650
Butanoate metabolism
slit00907
Pinene, camphor and geraniol degradation
slit00930
Caprolactam degradation
slit01100
Metabolic pathways
slit01110
Biosynthesis of secondary metabolites
slit01120
Microbial metabolism in diverse environments
slit01200
Carbon metabolism
slit01212
Fatty acid metabolism
Module
slit_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JQC75_00110 (fadB)
00650 Butanoate metabolism
JQC75_00110 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
JQC75_00110 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JQC75_00110 (fadB)
00310 Lysine degradation
JQC75_00110 (fadB)
00380 Tryptophan metabolism
JQC75_00110 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JQC75_00110 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JQC75_00110 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JQC75_00110 (fadB)
00930 Caprolactam degradation
JQC75_00110 (fadB)
Enzymes [BR:
slit01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JQC75_00110 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JQC75_00110 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JQC75_00110 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
JQC75_00110 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QRH01894
LinkDB
All DBs
Position
complement(25166..27316)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELTDDKIARLCFNAPGSVNKFDRETLASLNAALDVLKDSDAKAAVLTSGK
DTFIVGADITEFLALFAEEDAKLMEWIAQANVVFNKLEDLPFPTVSAIKGFALGGGCEAI
LATDFRVADTSAKIGLPETKLGLIPGFGGTVRLPRLIGADNALEWITTGKDQRPEDALKV
GAIDAVVAPENLEAAAIQMLKDALAGKLDWQARRARKQAPVTLPKLEAMMSFTTAKGMVY
AVAGKHYPAPMAAVSVVEQAAGMSRAEALIVEHNAFIKLAKTDVATALIGIFLNDQLVKG
KAKKAAKLAKDIKQAAVLGAGIMGGGIAYQSASKGTPIVMKDITQAALDLGLNEAAKLLS
AQVERGRSTPDKMAKVLNNITPALDYAPIKDVNVVVEAVVENPKVKAMVLAEVENMVADD
AIIASNTSTISIDLLAKSLKNPARFCGMHFFNPVHKMPLVEVIRGKDTSEETVASVVAYA
SKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYLL
DVVGLDTGHHAQAVMAEGFPDRMGKSGKDAIDVMYEAGRLGQKNSKGFYQYSIDKRGKPK
KEVVADSYDLLKSAFGELKSFDADEIIARTMIPMIIETVRCLEEGIVASPAEADMGLVYG
LGFPPFRGGVFRYLDTLGVANFVALADKYAHLGGLYQVTDAMRELASNNGSYYPKA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacaatccaggtcgaactgaccgatgacaagattgcccggctg
tgtttcaacgctcccggctcggtcaacaagttcgatcgtgaaaccctcgcctccctcaat
gccgcactcgatgttctcaaagactctgatgccaaggccgctgtactgacctccgggaaa
gacacctttattgttggcgccgatatcactgagtttttagccctcttcgctgaagaagac
gccaaattgatggagtggatagcccaggccaacgtagtattcaacaagctggaagacttg
cctttcccaaccgtgtcggccatcaagggcttcgccctgggcggcggctgtgaagcgatt
ctggccaccgatttccgtgttgccgacaccagcgccaagataggcctgccagaaaccaaa
ctcggtcttatccccggttttggcggtaccgtacgcctgccacgcctgattggtgccgac
aacgcactggagtggatcaccacaggtaaagatcagcgccctgaagatgcgctcaaagtg
ggtgccattgatgcggtagtcgccccggaaaatctggaagctgctgccattcagatgctc
aaagacgccctcgccggtaagctcgactggcaagctcgccgcgcccgcaaacaggcgcca
gtgacactgcccaagctcgaagccatgatgtctttcaccaccgccaaaggtatggtgtat
gccgttgccggcaaacactaccctgcgcccatggccgccgtgtctgtggttgaacaagct
gccggcatgagccgtgccgaggccttgatagtagagcacaatgcctttatcaagctggcc
aaaaccgacgttgccactgcgctcatcggcattttcctcaacgatcagctggtaaaaggc
aaggccaaaaaggctgccaaactggccaaggatatcaagcaagccgcggtgcttggcgcc
ggtatcatgggtggcggtatcgcctaccaaagtgccagcaagggcacccctatcgtcatg
aaagacatcactcaggccgcgctggatctgggtctgaatgaggccgccaagctgttgtcc
gctcaggttgagcgaggccgctctaccccagacaagatggccaaggtgctgaataacatc
acaccggcgctggactatgcccccatcaaagacgtaaacgtggtggtggaagccgtggtg
gaaaatcccaaggttaaggccatggtgctggcagaggtcgaaaacatggtggcagacgat
gccattatcgcctccaacacgtccaccatctccatcgatttactggcgaaaagcctgaaa
aatccggctcgcttctgcggtatgcacttctttaacccggtacataagatgccgctggtt
gaggtcattcgcggtaaagacaccagcgaagaaaccgttgcttctgttgtggcttatgcc
agcaagatgggtaagacccctattgtggtaaacgactgcccaggcttcttcgttaaccgt
gtgctcttcccgtattttgccggcttcaatggtctgctggcagaaggtggcgacttcgca
gccatcgataaagtgatggaaaagcaatttggctggccaatgggccctgcctacctgctg
gatgtggtgggtctggatacgggtcaccacgcccaggccgtaatggccgaaggattcccg
gaccgcatgggcaagtcaggtaaagacgctatcgatgtgatgtacgaagccggtcgtctc
ggtcagaagaacagtaagggcttctaccagtacagcatcgacaagcgcggcaagccgaaa
aaagaagtcgtggcagactcctacgacctgctcaagtctgcttttggtgagctgaagagc
tttgatgccgatgaaatcatcgcccgcaccatgatccccatgatcatcgaaacggtacgc
tgccttgaagaaggcatagttgccagccctgcagaagccgatatgggtctggtctatggc
cttggcttccctccattccgtggcggtgtgttccgctatctggatacgctgggtgttgcc
aacttcgtggcgcttgccgataaatatgcccatctgggcggcctgtatcaggtgaccgac
gccatgcgcgaacttgccagtaacaatggcagctactatccaaaggcctga
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