Shewanella livingstonensis: EGC82_17550
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Entry
EGC82_17550 CDS
T05875
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
slj
Shewanella livingstonensis
Pathway
slj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EGC82_17550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_17550
Enzymes [BR:
slj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
EGC82_17550
DNA repair and recombination proteins [BR:
slj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EGC82_17550
Prokaryotic type
EGC82_17550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AZG74400
UniProt:
A0A3G8M042
LinkDB
All DBs
Position
complement(4046378..4047040)
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AA seq
220 aa
AA seq
DB search
MTSHWQELFEQQQTQPYYQHLQNFIASQRADDKVVYPPDDEVFAAFDLTPLSEVKVVILG
QDPYHGPNQAQGLSFSVKKGIKPPPSLANIYKELTNDIEGFTTPEHGDLSAWAKQGVLLL
NTVLTVEQGFAHSHAKSGWETFTDSVLKQLDQQASPIIVVCWGNHAIKKGRLITASHHHV
LNGPHPSPLSAYRGFFGCGHFSSINRLLIEQGSKPINWQI
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccattggcaagagctgtttgaacaacaacaaacacagccatattatcaacat
ttgcagaactttatagcttcacaaagagcggatgataaagttgtttatccaccagatgat
gaagtgtttgccgcttttgatttaacaccactgtcagaggttaaagtggtgatattaggc
caagacccttaccacgggcctaatcaagcccaggggctgtctttttcggttaaaaaaggc
ataaaaccaccgccatcattagctaacatttataaagaattaacgaatgacatcgaaggt
tttacaacacctgaacacggcgatttaagcgcttgggctaagcaaggggtactattatta
aatactgtgctgacggttgagcagggattcgctcattcacacgctaaatctggctgggag
acatttaccgacagtgtactaaagcagttagatcaacaagcgtcaccgattatagttgtc
tgttggggcaatcatgcaattaagaaaggtcggcttatcacagcctctcatcaccatgtg
ctgaacggtcctcatccatcaccgttatcggcttatcgtggcttttttggttgtggtcat
ttttcaagtataaatcgattgttaattgagcagggcagcaaaccaataaattggcagatt
tga
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