Streptomyces lunaelactis: SLUN_23985
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Entry
SLUN_23985 CDS
T06347
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
slk
Streptomyces lunaelactis
Pathway
slk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SLUN_23985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slk03021
]
SLUN_23985
03400 DNA repair and recombination proteins [BR:
slk03400
]
SLUN_23985
Enzymes [BR:
slk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SLUN_23985
Transcription machinery [BR:
slk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SLUN_23985
DNA repair and recombination proteins [BR:
slk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SLUN_23985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AVZ74776
UniProt:
A0A2R4T6Q3
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All DBs
Position
5179498..5180520
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AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgctcagcgtccctcgctgaccgaagaggtcgtcgacgagtaccgctcgcgg
ttcgtgatcgagcccctcgagccgggcttcggctacaccctcggcaactcgcttcgccgt
acgctcctctcctcgatccccggcgctgctgtcaccagcatccggatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctcatcctgaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggtcccggcctggtcaccgctgctgacatcgccccgccggccggcgtcgaggtccacaac
ccggacctcgttctcgcgacgctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtgcagaacaagcaggtgggccaggagatcggc
cgtattccggtcgactccatctactcgccggtgctcaaggtcacgtacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccgcgtgacgccatggcgtcggccggtaagaccctggtcgagctgttcggt
ctggcgcgtgagctcaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgcgctcgccgccgatctcgccctgccgatcgaggagctcgagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggcgcgttccgag
gcggacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggcgctcaaggacagcccgcccggattcgacccgaccgccgcg
gcggacgcctttggcgcggacgacgacgcggatgccggtttcgtggagaccgagcagtac
tag
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