Streptomyces lunaelactis: SLUN_27825
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Entry
SLUN_27825 CDS
T06347
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
slk
Streptomyces lunaelactis
Pathway
slk03030
DNA replication
slk03410
Base excision repair
slk03420
Nucleotide excision repair
slk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLUN_27825
03410 Base excision repair
SLUN_27825
03420 Nucleotide excision repair
SLUN_27825
03430 Mismatch repair
SLUN_27825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slk03032
]
SLUN_27825
03400 DNA repair and recombination proteins [BR:
slk03400
]
SLUN_27825
Enzymes [BR:
slk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
SLUN_27825
DNA replication proteins [BR:
slk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SLUN_27825
DNA repair and recombination proteins [BR:
slk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
SLUN_27825
NER (nucleotide excision repair)
GGR (global genome repair) factors
SLUN_27825
MMR (mismatch excision repair)
DNA ligase
SLUN_27825
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SLUN_27825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
HHH
ILEI
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
AVZ75445
UniProt:
A0A2R4T8I6
LinkDB
All DBs
Position
6008437..6010617
Genome browser
AA seq
726 aa
AA seq
DB search
MAGEQQTALPADAREQHAQLAEQVEEHRFRYYVKDSPVISDGEFDRLLRALEALEEQYPG
LRTPDSPTQKVAGQYETELAKVEHRERMLSLDNAFDDEELAAWAERVAREVGTSDYHFLC
ELKIDGLAVNLTYEKGRLTRAATRGDGRVGEDITPNVRTISDIPNRLGGDRVPDLVEIRG
EVFFPMDKFQELNARRVAAGEQPYANPRNSAAGSLRQKDPKVTATLPLHMVVHGIGAREG
FDIDRLSQAYDLLRAWGLPTAKHNRVVDSLEGVREFIAYYGENRHSMEHEIDGVVVKLDE
IPLQGRLGSTSRAPRWAIAWKYAPEEVNTKLVNIRVGVGRTGRVTPYAQVEPVTVAGSEV
EFATLHNQDVVRAKGVLIGDTVVLRKAGDVIPEILGPVVDLRDGSEREFVMPSECPECGT
ALRPMKEGDVDLRCPNARSCPAQLRERLSYLAGRECLDIENFGEVAAAALTRPLEPAEPP
LKDEGDLFDLTVEQLLPIKAYVLDHDSGLPKRDPKTGEEKVVTVFANQQGEPKKNTLAML
ANIEVAKQRPLARIINGLSIRHVGPVASEALAREFRSIDRIEQATEEELAAVDGVGATIA
ASLKQWFAEDWHREILRKWREAGVRMEEGAGEDKGPRPLEGLTVVVTGTLQNHTRDGAKE
ALQSLGAKVAGSVSKKTAFVVVGDNPGSKYDKAMQLKVPVLDEEGFAVLLEQGPDAAREA
AVPTEA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
gtggctggcgaacagcagacggcactgcccgccgacgcacgggagcagcacgcccaactc
gccgagcaggtcgaggagcaccgcttccggtactacgtgaaggacagcccggtcatcagc
gacggggagttcgacaggctgctgcgcgcgctcgaggcgctcgaggagcagtaccctggg
ctgcgtacgcccgactcgccgacccagaaggtcgccgggcagtacgagacggagctggcg
aaggtcgagcaccgcgagcggatgctctccctggacaacgccttcgacgacgaggaactg
gccgcgtgggccgagcgcgtcgcgcgcgaagtcggcacctcggactaccacttcctgtgc
gagctgaagatcgacgggctcgccgtgaacctgacgtacgagaagggccggctgacgcgc
gcggcgacccggggcgacggccgcgtgggggaggacatcactccgaacgtccgcaccatc
tccgacatcccgaaccgcctggggggcgaccgcgtcccggatctcgtcgagatccgcggc
gaggtcttcttcccgatggacaagttccaggagctcaacgcccggcgggtggcggccggg
gagcagccgtacgccaacccgcgcaactccgccgccggttcgctgcggcagaaggacccg
aaggtcaccgcgaccctgccgctgcacatggtggtacacggcatcggcgcgcgtgagggc
ttcgacatcgaccgtctgtcgcaggcgtacgacctgctgcgcgcatggggcctgccgacc
gccaagcacaacagggtcgtggactcgctggagggcgtacgggagttcatcgcctactac
ggcgagaaccggcactccatggagcacgagatcgacggcgtggtcgtcaagctcgacgaa
atcccgctccaggggcggctcggctccacctcacgggcgccgcgctgggcgatcgcgtgg
aagtacgccccggaagaggtcaacaccaagctggtcaacatccgggtgggcgtcggccgc
accggccgcgtcacgccgtacgcccaggtcgagccggtcacggtcgcgggctccgaggtc
gagttcgccaccctgcacaaccaggacgtggtcagggccaagggcgtgctgatcggcgac
accgtcgtgctgcgcaaggccggtgacgtcatcccggagatcctcggtccggtcgtggat
ctgcgagacggcagcgagcgggagttcgtgatgccgtccgagtgccccgagtgcgggacg
gcgctgcggccgatgaaggagggcgacgtcgatctgcgctgccccaacgcccgctcctgc
ccggcccagttgcgcgagcgcctgtcctacctggccggccgtgagtgcctggacatcgag
aacttcggggaggtggccgcggcagcgctgaccagacccctggagccggccgagccaccg
ctgaaggacgagggcgacctcttcgacctcaccgtcgagcagctgctgcccatcaaggcg
tatgtcctggaccacgacagcgggctgcccaagagggacccgaagaccggcgaggagaag
gtcgtcaccgtcttcgccaatcagcagggcgagccgaagaagaacaccctcgcgatgctg
gcgaacatcgaggtggcgaagcagcgcccgctcgcccgcatcatcaacggtctgtccatc
cgtcatgtgggcccggtggcatcggaggcgctggcccgtgagttccgctccatcgaccgg
atcgagcaggcgacggaggaggagctggcggcggtcgacggggtgggcgcgaccatcgcg
gcctcgctcaaacagtggttcgcggaggactggcaccgcgagatcctgcgcaagtggcgg
gaggcgggcgtccgcatggaggagggcgcgggcgaggacaaggggccgcgtcccctggag
ggactcaccgtcgtcgtcaccggaacgcttcagaaccacacaagggatggcgcaaaagag
gcccttcagagcctcggcgcgaaagtggctggttccgtttccaagaaaacggccttcgtg
gtggtcggcgacaacccgggctcgaagtacgacaaggccatgcagttgaaggtgccggtg
ctggacgaggagggcttcgccgtgctgctcgaacaggggccggatgcggctcgtgaggcc
gcagttcccacagaggcgtaa
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