Staphylococcus lugdunensis N920143: SLUG_21560
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Entry
SLUG_21560 CDS
T01951
Symbol
pbp4
Name
(GenBank) penicillin-binding protein 4
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sln
Staphylococcus lugdunensis N920143
Pathway
sln00550
Peptidoglycan biosynthesis
sln01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sln00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SLUG_21560 (pbp4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sln01002
]
SLUG_21560 (pbp4)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sln01011
]
SLUG_21560 (pbp4)
Enzymes [BR:
sln01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SLUG_21560 (pbp4)
Peptidases and inhibitors [BR:
sln01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SLUG_21560 (pbp4)
Peptidoglycan biosynthesis and degradation proteins [BR:
sln01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SLUG_21560 (pbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
DUF1958
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
CCB54680
LinkDB
All DBs
Position
2284547..2285845
Genome browser
AA seq
432 aa
AA seq
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MKKIFIILILVLVSFTQFTPYLFAAESDAVLSPSQIATQYGYTGITAAYDPEGAINVSQT
GQILYNYHGNKKWYLASMTKLMTMYLTLEAVKKGDLSLDDKVKITQNHYRMSTLPELSNT
KLYPGEVYTIAELLQITVSNSSNAAALILANKVSGNVTSFTKLMNKKAKELGMTHTYFTN
PTGAENTQLQEFAPKLTTNDNNSTSTAKDYAILDQHVIADTPNILHFTKQLAPTQHGVTY
YTFNHSLEGASLSLPGTDGLKTGSSDIANYNHTITTKRGKFRINQVILGVGDYNNLGGEK
ERNKMGNAIMESSFNQYAYKKVLSKGEHNINGKTYYIKKDLYDVIPKTLHAKDYQFVIND
GEVHLDYKRQFISKQYGPPTVQVQKPMIHKADTIAKSTWKDHPIITSTAIGLLIIAIALI
VYQVIKRLFKRK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatttttataatacttatattggtgcttgttagctttactcagtttacccct
tatctattcgctgcagagtcggatgctgtgttaagcccaagtcaaatcgctacccaatat
ggctatactggcataactgctgcatacgatccagaaggtgcaattaatgtcagtcaaact
ggacaaatcttgtataattaccatggaaataaaaaatggtatcttgcctcgatgactaag
cttatgacgatgtatttaacattagaagctgtcaaaaaaggagacttatcgcttgatgat
aaagtgaaaatcacacaaaatcattatcgcatgtcaacgttacctgaattaagtaataca
aaactctatcctggagaagtgtataccattgcagaattactacaaattactgtatctaat
tcaagcaatgcagctgcattaatattagctaacaaagtatcaggcaacgtcacttcgttt
acaaagcttatgaataaaaaagctaaagagcttggaatgacgcatacatatttcactaac
ccaactggggcagaaaacacgcaactgcaagaatttgcacctaaactaacaacaaatgat
aataattcaacatctacagcaaaagattatgcaattcttgatcaacatgtcatcgcagat
acaccgaatatacttcactttacaaaacaactcgcaccaacgcaacacggtgtaacgtat
tatacatttaatcattcattagaaggtgctagcttaagcttaccaggaacagatggttta
aaaaccggttctagtgatattgctaattacaaccatactattacaacaaaacgtggtaag
tttagaattaaccaagttattctaggcgtaggtgattataataatctcggtggcgaaaaa
gagagaaataaaatgggcaacgctataatggaaagttcgttcaatcaatatgcatacaaa
aaagtactttctaagggcgaacataatatcaatggtaaaacatattatatcaaaaaagat
ctttacgatgttattcctaaaacattacacgctaaagactaccaatttgtcattaacgat
ggtgaagtccatttagattacaaacgtcaatttatttctaaacaatacggcccaccaacc
gttcaagttcagaaacctatgattcataaagcagataccatagctaaaagcacatggaaa
gatcatccaatcataacatccaccgctattggtttacttatcattgccatcgcactgatt
gtttaccaagttataaaacgtttgtttaaaagaaaataa
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