Shewanella loihica: Shew_0001
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Entry
Shew_0001 CDS
T00489
Name
(GenBank) chromosomal replication initiator protein DnaA
KO
K02313
chromosomal replication initiator protein
Organism
slo
Shewanella loihica
Pathway
slo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shew_0001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slo03032
]
Shew_0001
03036 Chromosome and associated proteins [BR:
slo03036
]
Shew_0001
DNA replication proteins [BR:
slo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Shew_0001
Chromosome and associated proteins [BR:
slo03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Shew_0001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DnaA
Bac_DnaA_C
DnaA_N
IstB_IS21
AAA
AAA_22
Kinesin
AAA_16
AFG1_ATPase
ATPase_2
KAP_NTPase
AAA_19
NACHT
CSTF2_hinge
Motif
Other DBs
NCBI-ProteinID:
ABO21874
UniProt:
A3Q8S6
LinkDB
All DBs
Position
111..1490
Genome browser
AA seq
459 aa
AA seq
DB search
MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGETLVLYAPNRFVLDWVRDKYLNTIN
QFFTEQMGSDAPKLRFDIGSRPASKPAAPAASTKSPVAPAAKSPSKPSFNSNEPAATANH
RSNMNPTYQFDNFVEGKSNQLGKAAALQVSENPGGAYNPLFLYGGTGLGKTHLLHAVGNG
IIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRSQE
EFFHTFNALLEGNHQVILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAILMR
KAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDLLA
LQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKELTNQSLPEIGDA
FGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtggcggtttcactttggcagcaatgtatcggacgactacaggacgagctttccgctcag
caattcagcatgtggatcagaccgttacaagccgaaatggatggggaaactctagtgcta
tatgcaccgaatcgattcgtactcgattgggtgagagataagtacctcaataccatcaat
cagttcttcaccgaacagatgggtagcgacgcccccaagctgcgtttcgacatcggtagt
cgccctgcgagcaaaccggcagcgccggctgcctcgaccaagagccctgttgcacctgcg
gcaaaatccccaagcaagccgtcatttaatagcaacgaacccgcggccacggcgaatcat
agaagcaatatgaatcccacctaccagttcgacaacttcgtcgagggtaagtctaaccag
ctgggtaaggcagccgccttgcaggtgtctgaaaatccaggtggcgcctataaccccttg
ttcctctacggtggtacgggcttgggtaagactcacctgctgcacgccgtgggtaatggc
atcatcaagaacaatccgaatgccaaggtggtttacatgcattccgagcgcttcgtacag
gatatggtgaaggcgctgcagaacaacgcgatcgaagagttcaaacgttactaccgtagc
gtcgatgcgttgtttatcgatgatattcaattctttgctaacaaagacagatctcaggaa
gagttcttccatacctttaatgccctgctagagggcaatcatcaggtgatcctgacttca
gatcgctaccccaaggagatcgacggggtggaagatcgcctcaagtcgcgcttcggttgg
ggtctgacggtggccattgagccgcccgagctagagacccgtgtggcgatcctgatgcgt
aaggcccaggagagtggtatcaacctgcccgatgaggtggccttctttattgccaagcgt
ctgagatctaacgttcgtgagctggaaggcgcgcttaatagggtgatcgccaacgccaac
tttaccggacgtccgatcactatcgattttgtgcgtgaagccctaagagatctcttggct
ctgcaggaaaaattggtcactatagacaacattcagaaaaccgtagctgaatactataag
atcaagatggccgacatgctgtcgaagcgccgctcacgcagcgttgccagaccgagacag
atggcgatggcattgtcgaaagagttaactaaccagagtttgcccgagattggcgatgcc
tttggtggccgtgatcatacgacagtgctacacgcctgtcgcaaaattgcccagctacgt
gaagaaagtcatgacattaaagaagattatgctaacttaatccgtacgctatcttcataa
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