KEGG   Shewanella loihica: Shew_0197
Entry
Shew_0197         CDS       T00489                                 
Name
(GenBank) protein of unknown function DUF796
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
slo  Shewanella loihica
Pathway
slo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:slo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Shew_0197
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:slo02044]
    Shew_0197
Secretion system [BR:slo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Shew_0197
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: ABO22069
UniProt: A3Q9C1
LinkDB
Position
complement(208521..209021)
AA seq 166 aa
MYKLAAMGLLALSSFTLNAATDMFLKIDGVDGESLDAQHRNEIDVLAWSWGASSDMRRTC
IQDISVTKYVDSASPQLLMNQMSHMQYPRATLTVRKAGGTPLEYIVIELRDVWVSSLSTG
GSGGEDRLTENITLNFEELKYQYTPQKADGSGGPAISATITSEKCR
NT seq 501 nt   +upstreamnt  +downstreamnt
atgtataaactcgcggccatgggcctattagcgctcagctccttcacgctgaacgcggct
acggatatgtttctcaagatagatggcgtcgatggcgagagcctggacgcgcagcaccgc
aacgagatcgatgtgctcgcctggtcttggggagcaagcagcgatatgcgacgcacctgc
attcaagatatcagtgtgaccaagtatgtggatagcgcctcaccccaactcctcatgaac
cagatgagccacatgcaataccctagagcgacgctgacggtgcgcaaggcgggtggcaca
cctcttgaatatatagtgatcgaattacgcgacgtatgggtctctagcctgtctaccggc
ggctctggcggagaagatcgcctcaccgagaacatcaccctaaattttgaagagctcaaa
taccaatacacaccacaaaaggcagatggcagcggcggaccagcgatctcggccaccatc
acaagcgagaaatgcagatag

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