Shewanella loihica: Shew_0809
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Entry
Shew_0809 CDS
T00489
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
slo
Shewanella loihica
Pathway
slo00630
Glyoxylate and dicarboxylate metabolism
slo00680
Methane metabolism
slo01100
Metabolic pathways
slo01120
Microbial metabolism in diverse environments
slo01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shew_0809
09102 Energy metabolism
00680 Methane metabolism
Shew_0809
Enzymes [BR:
slo01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Shew_0809
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
Pyr_redox_3
Fer4_7
NAD_binding_8
Fer4
DAO
Fer4_8
Fer4_9
Fer4_6
Fer4_21
HI0933_like
FAD_oxidored
Fer4_10
Fer4_18
Fer4_17
NAD_binding_7
Amino_oxidase
GIDA
F420_oxidored
FAD_binding_2
Thi4
AlaDh_PNT_C
Lys_Orn_oxgnase
FAD_binding_3
Fer4_15
Fer4_2
Fer4_16
Emfourin
Fer4_22
CxC7
Motif
Other DBs
NCBI-ProteinID:
ABO22681
UniProt:
A3QB33
LinkDB
All DBs
Position
complement(927171..931403)
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AA seq
1410 aa
AA seq
DB search
MIELTFDGQVVKANRGEDLLTCAKAAGIAIPNLCHLGKQLDDKLAGKQDCNLCYVEVRDE
KGDFHTVKACKTQVEAQLEVITHSAALSKRRQAALKHLLSDHFADCEAPCQQACPAGVDV
QSYLLHIAQGNHKEAVKVIKQTLPLPLSIGRVCPAFCESACRRGELDEPLAIRQLKRHAA
DLDLGSEDTYVPPKAPATGKRVAIIGSGPAGISAGYYLSNSGHEVTIFESMPKAGGWLRY
GIPEYRLPKQILDREIDLLCQNGLVIQTDTRLGRDIHLKELVNQFDAVCLAIGAQKAVPM
NYPGVDLEGCYLGVDYLKDHCTDNNYHTGQKVAVIGGGNTAIDCARTALRKGAEVTLAYR
RTRDEMPAEVYEIEEAEHEGVRFYFLTNPIENHGDANGRINAITFEKMRLGEPDASGRRS
PQTTGETFTEAFDTVIPAVSQTPDMTFLEHPESQLSTGEVALTRWNTFSGCEHTMSSGVE
KLFVLGDSRTGPATAVAAVADGRKAANAIEKLLSGELSCELTPAPFNSQKQDEQKPDSRH
FPARLLQAKAKMPELAINKRLDNFDEIELGFNDEEAMLEAARCLECGCQANTECALRDYA
TEYRVDGAALDKQGHRAFTQDASTPFINFDPNRCISCGACVAMCRQQSGHQAISFEPDSY
LALPQEMAATHSRQAPRAGFSATMADSQCVQCGNCVQVCPTGALTDARDKRQGVKHELKQ
TSTVCTYCGVGCRVIIHSDPVTGEIKRVSGDSRSQVNEGMLCVKGRFGFDFINSQQRLTQ
PLLRKDGELVPVSWNEAIDYIGTELGRIKAEHGGDAIAGLASAKATNEDNYLFQKLFRSV
IGTNNIDHCARLCHASTVTALQESLGSGAMTNDIPSIKSSDLIFILGSDTEAAHPIIASK
IKQAVSQHGARLVVADPKRVSIADSAELYVRHRPGSDVMLLNAIMQEIIKQGWHDEDYID
RRVEGFDALRTEVMKDDYSLDNAAKITGVGEEEIAQLARMIGTAEKTAIYYAMGITQHTS
GHDNVTAIANLQLLCGNIGIEGAGINPLRGQSNVQGACDMGALPNYFTGYQKVTDPEVQA
AFRQAWQQEWLPDQIGLAATEMMHALAHGRLKALYVMGENPVLSDPDQAHVMQGLESAEL
LIVQDIFMTETAQLADVVLPAASFAEKPGHFTNTERRVQRLQAAIDSPGLARRDWQIITD
IAKALGADWHYEDEASIWQELTRVTPQYRGIQWQDTDPSTPKGLLGKQWPCPEPGHEGTR
LMHKERFTRGLGKMTPVGYRLPAELPCEDYPFTLSTGRLLEQFHTGTLTRKTDGLNTLGS
PRVMMSAIDADRLGVNNGDVLTLSTRRGSINIAAFVTRRAQPGVLFLPFHFAEAAANKLT
NNVLDPVAKIPEFKICAVRVEKASEAICWS
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgatagaactcaccttcgacggccaggtcgtcaaagccaaccggggcgaagatctgctc
acctgtgccaaggccgcaggcatagcgatccctaatttatgtcatctgggcaagcaactg
gacgacaaactcgcaggcaaacaagactgtaacctctgctatgtcgaggtacgcgacgaa
aagggcgacttccacacggtcaaggcctgtaagacacaggtcgaggcacagctcgaggtg
atcacccattcggccgccctcagcaaacgccgccaggcggcactgaaacaccttttgagc
gaccacttcgccgactgcgaagccccctgccaacaggcctgtccggccggcgtagacgtg
cagtcctatctgctgcatatcgcccagggcaaccacaaggaagcggtcaaggtgatcaaa
caaaccctaccgctaccgctctctatcggccgtgtctgcccggccttttgcgaatcggcc
tgtcgccgcggcgagttggatgagcccctggccattcgccaactcaagcgtcacgccgcc
gatctggatctgggcagtgaagacacctatgtgccgcccaaggcgccagctaccggcaaa
cgcgtcgccatcataggcagcggcccggcggggatcagcgcgggttactatctctccaat
tcaggccatgaggtgaccattttcgagtccatgcctaaggcgggcggctggctaagatac
ggtatccccgaataccgtctgcccaagcagatcctggacagagagatagacctgctgtgc
cagaatggcctggtgatacagacagatactcgtctcggccgcgacatccacctcaaggag
ctggtcaaccaattcgacgccgtctgtctcgccatcggcgcccagaaggcggtgcccatg
aactatcctggcgtagacctcgaaggctgctacttgggggtggattaccttaaggatcac
tgcacagacaacaactaccacacaggccagaaggtggcggtgatcggcggcggcaacacc
gccatcgactgcgcccgcaccgcgctgcgcaagggcgccgaggtaaccctggcctatcgc
cgcacccgcgacgagatgccggcagaggtctatgagatagaggaggccgaacatgagggc
gtgcgcttctatttcctcactaaccctatcgaaaaccatggcgacgccaatggccgtatc
aatgccatcaccttcgagaagatgcgccttggcgaacccgatgcctccggcagacgctca
ccccagaccacaggcgagaccttcaccgaggcgttcgatactgtgatcccggcggtctcc
cagaccccggacatgaccttcctcgaacatccagagagccagctctccaccggcgaggtg
gccctgacccgctggaacaccttctccggctgtgaacatactatgtcctcaggggtggag
aaactgttcgtgctcggtgattcgcgcaccggccccgccacggcggttgccgcggtggcc
gatgggcgtaaggccgccaatgccatcgagaaactgctgagcggcgagctgagctgtgag
ctgacacctgcgcccttcaactcccagaagcaggatgagcagaagccagacagccgtcac
ttcccggctcgtctgctacaggccaaggccaagatgccggaactcgccatcaacaagcgc
ctggataatttcgacgagatagaactcggctttaacgatgaggaggcgatgctcgaggcc
gcccgctgcctggagtgtggctgtcaggccaacactgagtgtgccctgcgggactacgcc
accgagtaccgtgtcgatggtgccgcgctcgataaacagggccaccgcgcctttacccag
gatgccagcacgccttttatcaacttcgaccccaaccgctgcatcagctgcggggcctgc
gtcgccatgtgccgccagcagtctggccatcaggcgatcagtttcgagcccgacagttac
ctggcactgccccaggagatggccgcaacacacagccgccaggcgccccgcgccgggttc
agcgccaccatggccgacagccaatgcgtccagtgcggtaactgtgtccaggtctgcccc
acaggggcgctgaccgatgccagagacaagcgtcagggggttaaacatgagctgaaacag
acctccaccgtctgcacctactgcggcgtaggctgccgtgtcatcatccatagcgatccc
gtgactggtgagatcaaacgtgtctcgggcgacagccgatcccaggtcaacgaggggatg
ctctgcgtcaagggccgcttcggatttgacttcatcaacagccagcaacgtctgacccag
ccgctgctgcgcaaagatggcgagctggtgccggtcagctggaatgaggcgatcgactac
ataggcaccgagcttggtcgcatcaaggccgaacatggcggtgacgccatcgccggtctg
gcctccgccaaggcgaccaacgaagataactatctgttccaaaagctgtttagaagcgtc
atcggcaccaacaacatagatcactgcgcccgcctgtgtcatgcctcgacggtcaccgcc
ctgcaggagagccttggcagcggcgccatgaccaatgatattccgtcgataaaatcctcg
gatctcatcttcatcctgggctcggataccgaagccgcccaccccatcatcgcctccaag
atcaaacaggcggtgagccaacacggtgcccgcctggtggtggccgaccccaaacgggtg
agcatcgccgacagcgccgagctctacgtgcgtcatcgccccggcagcgacgttatgctg
ctcaacgccatcatgcaggagatcatcaagcagggctggcacgacgaggactatatcgac
cgacgcgtagaaggattcgatgcacttcgcaccgaggtgatgaaggacgactacagccta
gacaatgcggccaagatcactggggttggcgaagaggagatagcccagctggcccgcatg
ataggcacggcagagaagaccgccatctactatgccatggggatcacccagcacacctcg
ggacacgacaatgtcaccgccatcgccaacctgcaactgctgtgcggcaacataggcatc
gagggcgcggggatcaatccactgcggggccagagcaatgtccagggcgcctgtgacatg
ggcgccctgcccaactacttcaccggctaccagaaggtgaccgaccccgaggtgcaagcc
gccttcagacaggcctggcaacaggagtggctaccagatcagataggtctggcggccacc
gagatgatgcacgccctggcccacggcaggctcaaagccctctatgtgatgggagaaaac
cctgtactgagcgatcccgaccaggctcatgtgatgcaagggctggagtcggccgagctg
ctgatcgtccaggatatcttcatgacggagacggcccagctggccgacgtggtattgccg
gccgccagcttcgccgagaagccaggccacttcaccaataccgagcgtcgggtgcagcgt
ctgcaggcggccatcgacagcccaggcctggcccgccgcgactggcagatcatcacagat
atcgccaaggcccttggcgccgactggcactatgaggatgaagcgtccatctggcaggag
ctgacccgcgtcacaccccagtaccgcggcatccaatggcaggacacagacccgagtacg
ccgaaaggcctgctgggtaagcagtggccctgcccagagcctggccatgagggcacccgc
ctgatgcataaagagcgctttacccgagggctcggcaagatgacgcccgtcggctaccgc
ctaccggccgaactgccctgcgaagattatcccttcaccctctccaccgggcgcctgctg
gagcagttccacaccggcaccctgacccgcaagacggacggcctcaataccctggggtcg
cccagggtgatgatgtcggccatcgacgccgaccgtctaggggtgaacaacggcgacgtg
ctgactctgtcgacgagacgcggcagcatcaacatcgccgccttcgtcacgcgccgcgcc
cagccgggagtgctcttcctgcccttccactttgccgaggcggcggctaacaagctgacc
aacaatgtgctggaccctgtggccaagatccccgagtttaagatctgcgccgtcagggtc
gagaaggccagcgaggcgatctgctggtcttag
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