Shewanella loihica: Shew_1111
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Entry
Shew_1111 CDS
T00489
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slo03000
]
Shew_1111
Transcription factors [BR:
slo03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Shew_1111
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_26
Crp
TnsD
CoA_binding_3
FlgM
Motif
Other DBs
NCBI-ProteinID:
ABO22982
UniProt:
A3QBY4
LinkDB
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Position
complement(1280073..1281092)
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AA seq
339 aa
AA seq
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MKVTINDVAKYAGVSIKTVSRVTNNEPSVRQATIDKVNQAIAALNYQPNVAARNLAGTKS
YVIAFVYDNPNAYYVIDMQNGILSSCKQRGYELLIHPCDAKSDNICQELVDMVRHARLSG
LVLTPPLSEDPKVLAALDQINANYVRIIAGEEVSTTDGLSILVNDKHGAVSITQHLIDLG
HKNIAFLSGDHQHESTKERLAGFKAALQSNHLSLDESNIINGQYSFESGVEGAKTLLAKA
NRPTAIVACNDEIAAGALFAARLAGVAIPDELSIVGFEDSPFSRQTWPKLTTVHQPNKLI
AQTATELLIENQGNKQSETAHQVFIPEPVLRDSSASPKA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcaccattaatgacgtcgccaaatatgccggcgtctccataaaaacggtttca
cgggtcacaaataacgagccttcggttcgtcaggcgacgattgataaagtgaatcaggcg
attgccgcacttaactaccagcctaatgtcgctgcccgtaatctagccggcacaaaatcc
tacgtgatcgcctttgtctacgacaaccctaatgcctactatgtcattgatatgcaaaat
ggtattttgtcatcttgtaagcaaagaggctatgagctcctcatccatccctgcgatgct
aagtcagataatatctgccaggagctggtcgatatggtgcgccatgccaggctgtcaggc
ttggttttaaccccgccgctatcggaagacccaaaagtcttggctgccttggatcagatt
aatgccaattatgtacgcattattgcaggggaagaggtgagcacaaccgatggcttatcg
atcctggtcaacgataaacatggagcggtttccatcacccagcaccttatcgatctcggc
cataaaaatatcgcctttctgagcggtgaccatcagcacgaatccaccaaggaacgtctc
gccggttttaaggccgccctgcaaagcaatcacctatcgcttgacgagtccaacatcatc
aatggtcagtattcttttgaatcgggtgtagaaggcgctaaaacactgctggcgaaagcc
aatcggccgacggccatagtcgcctgtaacgatgaaattgccgcgggggctctcttcgcg
gctaggttagcaggggtagcaatacccgacgaactctctatcgtgggtttcgaggacagc
cccttctctagacagacctggcctaagctaaccacagtccatcagccaaataagttgata
gcgcagacggcaaccgagttacttatcgagaatcagggcaacaagcagagtgagacggct
catcaggtcttcattcccgagccggtactaagagactcatcggcaagcccaaaggcctag
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