Shewanella loihica: Shew_2954
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Entry
Shew_2954 CDS
T00489
Name
(GenBank) methyl-accepting chemotaxis sensory transducer
KO
K03406
methyl-accepting chemotaxis protein
Organism
slo
Shewanella loihica
Pathway
slo02020
Two-component system
slo02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shew_2954
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Shew_2954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
slo02035
]
Shew_2954
Bacterial motility proteins [BR:
slo02035
]
Flagellar system
Chemotaxis proteins
MCPs
Shew_2954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
DUF948
TACC_C
DUF4083
Motif
Other DBs
NCBI-ProteinID:
ABO24820
UniProt:
A3QH72
LinkDB
All DBs
Position
complement(3501394..3503256)
Genome browser
AA seq
620 aa
AA seq
DB search
MLIRHKLLVSAAVSICSVIAMFGLQRFSAAKLDDLSHAAQQVIELEKDVLSLRRDEKDFF
ARLDLAYLDKHKTQARELDEKMVSLGAIFDRHDISQSDLQAFRQNLTRYESIFAEIAELQ
KQIGLHPKDGLYGALRSAVHNVETLVKEKNEPELMVTMLQLRRNEKDFMLRRAMSYLDKF
KGNLALLRQQVSGAMLSDSVKGELNALIDDYEKNFKALVSKEQELGLDKDSGSMASLRDS
ISSAEKSLVQLKAQSMDAISDAESATVTISIVVFILITLVLIGFTLAIIRSIMEPVQRIS
DAISRIEATKDLTLRCDTKVDDEIGQIARHFNSMVESFQSLIREVLTSVEVVNHSCQELS
ENSMRASEGVGRQLNETDMVATAITEMGATIDEIASNTELAAERAGNTHDNAQQGQVGVE
HTIEKIQALAAQLTDSAQVVSELEKDSETIGSVLDVIRGIAEQTNLLALNAAIEAARAGE
QGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQLMEATQRQGIESADQAAS
AGALLEQINADVTNIMDMSTQIAAAIEEQSMVASEVNKNVVVIRDIAAESAQAADENAKA
SDDVKARTQVLYQAVSLFKI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgctcattcgtcacaaattactcgttagcgcagcagtgtctatctgttctgtgatagcg
atgtttggcttgcagcgcttttcggcggcaaagctggatgatttgtcccatgctgcacaa
caagttatcgaacttgaaaaggatgttttgagtttacgtcgagatgaaaaagactttttt
gcccgtttggatctggcctatctagataagcacaagacgcaggcgagagagttagacgag
aagatggtcagcctgggagccatcttcgatcggcatgatatctcccagagcgatctgcaa
gcctttaggcagaacctgacccgctacgagtctatctttgccgagattgccgagctgcaa
aagcagattggcctgcatcctaaggatggcctctatggtgcgctgcgcagcgcggtgcat
aacgtagagaccctggtgaaagagaagaacgagcccgagctgatggtgaccatgttgcag
ctgcgccgcaacgaaaaagattttatgctcaggcgcgccatgagttatctggataagttt
aaaggcaacttggcgctgctgagacagcaagtttctggcgccatgttaagcgattcggtc
aaaggtgagcttaatgccctgatcgacgattatgagaagaacttcaaggccctggtcagc
aaagagcaggagctgggtctggacaaagacagtggcagcatggcgagcctgcgagacagt
atttcctcggcagagaagtccttggtgcagcttaaggcacaatccatggacgcgattagc
gatgctgagagcgcaactgttaccatcagtatcgttgtttttatcctaattactctggtt
ttaatcggtttcactctggcgatcattcgcagcatcatggagcctgtgcagcggatcagc
gatgcgatttcacgcatcgaggcaaccaaagatctgaccctgagatgcgatactaaggtg
gatgatgaaatcggccagatagcccgtcattttaatagcatggtggagtcgtttcagtcg
ctgatccgagaggtgctgacctcggtcgaggtggtgaatcactcctgtcaggagctgtcg
gagaactcgatgcgtgcctcggaaggggtgggacgtcagctcaatgagaccgacatggtg
gcgaccgcgatcaccgagatgggggcgaccatagatgagattgccagcaataccgagctg
gcggcagagcgggccggcaacactcatgataatgctcagcaaggccaggtcggcgtcgag
cacaccatagagaagatccaggcattggcggcgcagctgaccgattcggcccaggtggtc
tccgagcttgagaaagacagcgaaaccattggcagcgtgttggatgtgatccgtggaatt
gcagagcagaccaacctactggcgctaaatgccgccatcgaggctgccagggccggtgag
cagggcagaggctttgccgtggtcgccgatgaggtgagaagtctggcgatgcgtacccag
gagtcgaccgaggagatcgccggtatcattcagacactgcagtctcgtactcgctctatt
gtgcagctgatggaagcgacccaaaggcaaggcattgagagtgccgatcaggcggcaagt
gccggcgccctgctggagcagatcaacgccgatgtcaccaacatcatggacatgagtacg
caaatcgccgcggcgatcgaggagcagagcatggtagcctccgaggtgaacaagaatgtg
gtagtgatccgcgacatcgccgccgagtcggcccaggcggcggatgaaaacgccaaggcc
tccgacgatgtgaaggcgcgcactcaggtactctatcaggcggtgagtctgtttaagatt
tag
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