Shewanella loihica: Shew_3499
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Entry
Shew_3499 CDS
T00489
Name
(GenBank) (p)ppGpp synthetase I, SpoT/RelA
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
slo
Shewanella loihica
Pathway
slo00230
Purine metabolism
slo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Shew_3499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slo03009
]
Shew_3499
Enzymes [BR:
slo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
Shew_3499
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
Shew_3499
Ribosome biogenesis [BR:
slo03009
]
Prokaryotic type
Other maturation factors
Shew_3499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
ACT_4
RelA_AH_RIS
HD
ACT
Motif
Other DBs
NCBI-ProteinID:
ABO25365
UniProt:
A3QIR7
LinkDB
All DBs
Position
4184648..4186753
Genome browser
AA seq
701 aa
AA seq
DB search
MYLFEGLKESASSYLEATQVELLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILADMR
LDHETLMAALLHDTIEDTPVTKEELSELFGESVGELVEGVSKLDKLKFRDKKEAQAENFR
KMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHNIKT
ELEDLGFQAYYPMRYRVLKEVVKSARGNRKELIQNIEGAIKTRLEDTGLKGTVKGREKNL
YSIYNKMCNKELQFQEVMDIYAFRVIVDSIDTCYRVMGAMHGLYKPRPGRFKDYIAIPKA
NGYQSLHTSLFGPHGVPVEIQIRTEDMDQMADKGVAAHWLYKGAGSAQQGTTTQVRARKW
MQSLLELQQSASTSFEFVENFKTELFPEEIYVFTPEGRILELPVGATAVDFAYEVHTDVG
NTCVGARVNRQAYPLSQPLISGQTIEIITAKGARPNAAWLNFVVTGKARAKIRQLLKSLK
EDDAVLLGKRLLNHALGDIKLKDIPQEQIDKVVSETKHATLDSLLADIGLGNAMSIVIAQ
RLKGDRVEQHEHKESNMMPIRGAEGMLVSFANCCRPIPGDAVIAHVSPGKGLVVHMESCA
NIRGYQGEPDKYIPVHWDNAEGVEFQANLRIEIVNHQGALAKITSIVAAEGSNIHNLSTE
ERDGRVFLINLRISVTDRVHLANVMRRIRVLPEVLRTSRNR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
ttgtatctgtttgaaggtctcaaggagtctgcgtcaagttacttagaagcgacgcaggta
gaattactcaagcaggcctatcaggtagcgcgcgatgctcatgaagggcagatgcgcacg
agtggcgaaccctacattacccatccggttgcggttgcccgcatcttggccgatatgcgt
ctcgatcatgagacactcatggccgccctgctgcacgacaccattgaagatacccctgtc
accaaagaagagctctcggagctgtttggtgagtctgtgggcgagctggtcgaaggcgtc
tccaagctggacaagctaaagttcagagacaagaaagaagctcaggcggaaaacttccgc
aagatgatgatggccatgacccaggatatccgggtgatcctcatcaagctggccgaccgc
acccacaacatgcgcacccttggcgccctgcgtcccgacaagcgtcgccgcatcgcccgc
gaaaccctggaaatttacgcccccatcgccaaccgtctgggtattcacaatatcaagact
gaactggaagatctgggctttcaggcctattaccccatgcgctaccgggtactcaaagag
gtggtcaagtctgcacgtggcaaccgaaaagagctgatccagaatatcgaaggcgctatc
aagacccgcctcgaagacacaggtctcaagggcacggtcaagggccgagagaaaaacctc
tattccatctacaacaagatgtgtaacaaggaactccagttccaagaggtgatggatatc
tatgcgtttcgggtgatcgtcgactccattgacacctgttatcgcgtcatgggcgccatg
cacggcctgtataagccgcgtcccggtcgcttcaaagattatattgccatccccaaggct
aacggttatcagtcgctgcatacctcgctatttggtccacacggcgtaccggtggagatc
cagattcgtaccgaagatatggatcagatggccgacaagggggttgcggcccactggctc
tacaagggcgccggttcggcccagcaaggcaccaccactcaggtgcgtgcccgcaagtgg
atgcagagcctgctggagctgcaacagagcgccagcacctccttcgaattcgtcgaaaac
ttcaagacagagctgttcccggaagagatctatgtcttcaccccagagggacgcattctc
gagctacctgtgggcgccactgcggtggactttgcctacgaggtgcataccgacgtgggc
aacacctgtgtcggcgcgcgggtcaaccgtcaggcctatccgctgagtcagccgctgatt
tccggtcagactatcgagatcatcaccgccaagggcgcgcgccccaacgccgcctggctc
aacttcgtggtgacgggtaaggcacgcgctaagatcagacagctgctcaagagcctcaaa
gaagacgatgccgtactgctcggcaagcgtctgctcaaccacgccctgggcgacatcaag
ctcaaggatatccctcaggagcagatcgataaggtggtgagcgagaccaaacacgccacc
ctagattccctgctggccgacatcggcctgggcaacgccatgagcatagtgattgcccag
cgtctcaagggcgatcgggtcgagcagcacgaacataaagaatccaacatgatgccgatc
cgcggcgccgaaggcatgctggtctccttcgccaactgttgtcgccctatcccaggtgat
gcggtgatcgcccatgtgagtccgggtaaaggcctggtggtgcacatggaaagctgcgcc
aacatccgcggttatcagggcgagccagacaagtatattcctgtgcactgggataacgcc
gagggcgtcgagttccaggccaacctgcgcatcgagatcgtcaaccaccagggcgcgctg
gccaagatcacctctatcgtggccgccgagggctcgaatatccataacctgagcaccgaa
gagcgcgacggccgggtattcttgattaacttacggatctcggtcaccgaccgggtccac
ttagccaacgtgatgcgccgtatcagggtactgccggaagtgctgcgcacatcgcgtaat
cgttag
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