Solanum lycopersicum (tomato): 101249429
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Entry
101249429 CDS
T02665
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
sly
Solanum lycopersicum (tomato)
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
101249429
NCBI-ProteinID:
XP_004233623
UniProt:
A0A3Q7FC62
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Position
2:complement(53160458..53180199)
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AA seq
1441 aa
AA seq
DB search
MSADAGTLTLDSTTLYITALNSLSDKSSSNSIPLSLPLPPIPSSIPQPKLIPRTRFIIDG
FKYAADFSVSYFLSHFHSDHYTGLSSNWSKGIIFCSSITANLLIEVLNVPAQYVVSLPLS
EAVLIDGSEVLLIDANHCPGAVQFLFKVPVSDGKFERYVHTGDFRYCDDMKLEPVLNAFV
GADAVFLDTTYCHPKFIFPSQQESIDYIVGVIEKSGVENEGSLKNILFLIATYVIGKEKI
LMEVSRRCQRKIHVDGRKMSVLGVLGHGEDGVFTTVESETDVHVVGWNVLGETWPYFRPN
FEKMDKIMNEKGYSKVVSFVPTGWTYEVKRNKFSVRKKDSFEIHLVPYSEHSNYDELREY
VKFLKPKHVIPTVGTDVEKLDSKHADAMRKHFAGLVDQMAIKQEFLMHFHPSVQGKEDVD
TKESGLALVRITEEENTNRSTHTPVSIIKQENEDTSSDSKSCNAADMDTVIPSSFPQGES
VSPGLEKISEGDMEEILEELQGCLPTWVTRGQMLDLVSISHKNVVDAVSYFYEHETEYRE
QVTASNSVTSSLEANSANKSALPCKPCLGKSLQQDETAASSKTVKLPNTDSSCSKKVSPG
KRKRSTGNKSSSSSNKVSPGIRKRSTGNKSFEKAKGHTSMESGGPKQCTITKFFSKTLPL
PLQNQNSEAGSKNFHDDSCMLPNASIEAYKEEADRFIQIMNGDDSLRSYATTVLAKTKGD
ISMALDIYFSEYKDVGETNGDGISKTNKLLQPQCAKEVYTSSKDDKLPKILGDVDPNLSL
CGVPFADNAVNYVSLPHEEYSPVEHACWSKGQATPYIHLARTFELVKEEKGKIKATSMLC
NMFRSLLALSPEDVLPAVYLCTNKIAPDHENMELNIGGSTVVAALEEACGTKKSKVRELY
NSLGDLGDVAQLCRQTQSLLAPPVALTIRGVYSALRRISLQAGSGSAIRKKSLIVNLMCS
CREKEMKFLVRTLVRNLRIGAMMRTVLPALAQAVVFNSTPYEGLVENLKDCLQRLSAEVV
EAYNILPSLDVLVPSLMEKGIEFSSNTLSMAPGIPIKPMLAKITNGVPQVMKLFQNKAFT
CEYKYDGQRAQIHKLSDGSVRVFSRNGDETTSRFPDLVNIITESCDSRGATFILDAEVVA
IDRQNGPKLMSFQELSSRERGSKDSIIALDKIKVEICIFVFDIMFANGEQLLNLPLRQRR
KYLKDLFGDGKVGYLEYATEMTVECDDACADDEATLARMNSFLNDALHASCEGIMVKSLD
EDAGYTPSKRSDAWLKVKRDYVEGLNDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPDTE
EFQSVCRVMSGFSDSFYVEMRDFFDADKICQKKPPYYRSEEVPDMWFSPEVVWVIRGADF
TVSPVHHAAIGLVHPSRGISVRFPRFIRCLSDRKPEECSTSADIADMFRTQIRKMDVKVE
K
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgacgccggaaccctaaccctagactcaaccactctgtacataaccgctctc
aactccctctctgataaatcctcatcaaattcaatcccattgtcccttcctctccctcca
atcccttcttctatcccccaaccaaaactcatcccaagaactcgctttatcatcgacggt
ttcaaatatgccgctgatttctccgtttcttacttcctctcccattttcactccgatcac
tatactggcctctcctctaattggtctaaaggtatcatattctgttcctccatcactgct
aaccttctcatcgaagttctcaatgttcccgcgcaatatgtagtatctttaccgctctcc
gaagcggttctaatagacggttctgaagttcttctcatcgatgccaatcattgtcccggt
gctgtgcagttcttatttaaagttccagttagtgatggaaaatttgagcggtacgttcac
acaggtgattttcgttattgtgatgacatgaaattagagcctgtattgaatgcatttgtg
ggtgctgatgctgtatttttggatacaacttattgtcatccgaaatttatattccctagt
caacaggagtcaattgattatatagttggagttatagagaaaagtggagttgagaatgag
ggttcattgaaaaatatcttgtttcttattgctacttatgtcattgggaaagagaagatt
ttaatggaggtttcacggaggtgtcagagaaagatccatgttgatggacgaaaaatgtcg
gttttaggagtattaggtcatggggaggatggagtatttactaccgttgagtctgaaact
gatgttcatgttgttgggtggaatgtattgggtgagacttggccatatttcaggcctaat
tttgagaaaatggataagatcatgaatgagaaaggatattccaaggtggttagttttgtc
cccacaggttggacttatgaagtgaagcggaataagttttcagtgagaaagaaagattcc
tttgagatacatcttgttccatatagtgaacattcaaattatgatgagcttagagaatat
gtgaaatttttgaaaccaaagcatgtcatcccaacagtaggtacagatgttgagaagctg
gatagcaaacatgcagatgccatgcggaagcattttgctggcttggttgatcagatggcc
atcaagcaagaatttctaatgcattttcatccttctgtccaagggaaggaagatgtagat
acaaaagaatctggtcttgctttagttagaattacggaggaagaaaacacaaacagatct
actcatactccagtcagtatcatcaaacaagaaaatgaggatacttcatctgattctaaa
agctgcaatgctgctgatatggatactgttatcccttcctcatttcctcaaggagaatct
gtgtcgccaggtttagaaaaaataagtgaaggtgatatggaggaaatactagaagaactt
caaggctgtttgcccacttgggtaactagaggtcagatgttggatttagttagtatttca
cataaaaatgttgttgatgcagtctcatacttttacgaacatgaaacagaatatcgtgaa
caggtcactgccagtaattctgttacctcttctttagaggcaaactcagcaaataagtct
gcattgccttgtaaaccatgtcttggtaaaagcctgcagcaagatgagacagctgcgtca
agtaaaactgttaaactacccaacacggacagttcctgtagcaaaaaagtttctcctggt
aaaaggaagagaagtactggaaacaagtccagttccagtagcaacaaagtttctcctggt
ataaggaagagaagtactggaaacaagtcatttgaaaaagcaaaaggacatacgagtatg
gaatctggtggaccaaagcaatgtactataacaaagttcttcagtaaaacgctgcctctt
cctttgcagaatcaaaacagtgaagccggtagtaaaaatttccatgatgatagttgcatg
ctaccaaatgcctctatagaggcttataaagaggaggctgatcggtttattcagattatg
aatggggatgactcattgagaagttatgctaccacagtactagcgaagactaaaggagac
ataagtatggcacttgatatttatttttcagaatacaaagatgtaggagagactaatgga
gatgggatttctaaaacaaacaaattgttgcaacctcagtgtgctaaagaggtttacact
tcttccaaagatgataaattacccaaaatattaggagatgttgatcccaatttgtcgttg
tgtggtgttccctttgctgataatgctgtaaattatgtatcacttccccatgaggaatac
tctcccgtggaacatgcttgctggagtaaggggcaggctactccatacatacatcttgca
cgaacttttgaattggtaaaggaagaaaaagggaagataaaagcaacgtcaatgttgtgc
aatatgtttcggagcttgctagctttgtctccggaggatgtgcttcctgctgtgtacttg
tgcacaaacaagatagcccctgaccatgaaaatatggaattgaacattgggggtagtact
gttgtagcagcactagaggaggcatgcgggacaaagaaatcaaaagtacgagaactatac
aacagcctcggtgatcttggtgatgttgctcaactttgccgacaaacacaatcattactt
gctcctccagtggcacttacaattaggggtgtatactctgctcttagaaggataagcttg
caagcaggtagtgggagcgccatccgaaagaaaagcctgattgtcaatctcatgtgttca
tgtagagagaaggagatgaagtttcttgtgagaacgttggttcggaatttgcgcattgga
gccatgatgagaactgttcttcctgcattagctcaagcagttgtgttcaattctactcct
tatgagggactggtcgaaaacctgaaagattgtctgcagcgactttcagcagaagtagta
gaagcatataacatccttcccagcttggatgtacttgttccttccttgatggagaagggg
attgagttttcctcaaatacattgtcaatggctccaggcatacccatcaaaccaatgctt
gcaaagattactaatggggtccctcaagtgatgaagctctttcagaacaaagcctttaca
tgtgaatacaaatatgatggtcagcgagctcagattcataaactgtctgatggttcagtc
cgtgtattttcaaggaatggggatgagacaacatctagatttccggatttggtaaatatt
attacagaatcatgtgattccagaggagcaacatttatcttggatgcagaggttgttgca
attgataggcaaaatggtccaaagctcatgtcgttccaagaactatcttcacgtgagagg
gggtccaaagattccatcattgcgttagataaaattaaggttgagatatgcatttttgtt
ttcgatatcatgtttgcaaacggagaacaattgttgaatctgccgctccgtcaaaggcga
aaatatttgaaggatttatttggtgatggcaaagtaggttatttagagtacgcgacagaa
atgactgtagagtgcgatgatgcttgtgcagatgatgaagctacactggctaggatgaac
agctttcttaatgatgcactacatgcttcatgtgaagggatcatggtgaagtcccttgat
gaagatgctgggtacacaccctcaaagcgctctgatgcatggttaaaggtcaagagagac
tatgttgaaggattaaatgattccctggacttggttccaattggtgcatggcatgggaat
ggaagaaaagcaggatggtatagtcctttccttatggcctgctacaaccctgacacggag
gaatttcagagtgtctgccgggtcatgtctgggttttctgattccttctatgtagagatg
agagacttcttcgatgcggacaagatctgccagaaaaagccaccctactaccgaagtgaa
gaggttccggatatgtggttttctccagaagttgtgtgggtgataaggggtgctgacttc
acagtgtcaccagtgcatcacgcagctattggtttagtccatccatctcgtggtatttct
gtcagatttcccaggttcatccggtgtttgtcagatagaaaacctgaggaatgtagcaca
tctgcagatatagctgacatgttccgcactcagattagaaaaatggatgtgaaggttgaa
aaatag
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