KEGG   Solanum lycopersicum (tomato): 101249951
Entry
101249951         CDS       T02665                                 
Name
(RefSeq) oligoribonuclease isoform X2
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101249951
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sly03019]
    101249951
   03009 Ribosome biogenesis [BR:sly03009]
    101249951
Messenger RNA biogenesis [BR:sly03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     101249951
Ribosome biogenesis [BR:sly03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    101249951
SSDB
Motif
Pfam: RNase_T Dicer_PBD
Other DBs
NCBI-GeneID: 101249951
NCBI-ProteinID: XP_004246252
UniProt: A0A3Q7I1Z7
LinkDB
Position
9:16999300..17016764
AA seq 235 aa
MNQLSNAFSLLNLDVADSQAEITNGDTDRVTGEAQKEVDERVQKLESASGECKLPLVWID
LEMTGLDIEVDKILEIACVVTNGNLTKSIEGPDLVIHQAKLCLDNMGTWCQEHHAASGLT
EKVLKSTVTEEEAEKLVIEFVKRNIGTYTPLLAGNSVYVDFQFLKKYMANLASLFSHVLV
DVSSVKALCLRWYPRDGKKAPKKENKHRAMDDIKESIAELKYYKGHIFKASKSNK
NT seq 708 nt   +upstreamnt  +downstreamnt
atgaatcaactctcaaatgcgttttcattgctgaatttggatgttgcagatagccaagct
gagattactaatggagatactgatagagtaacaggagaagctcagaaagaagtagatgag
cgggttcagaagctagaatcagcttcaggagagtgcaaattgccgcttgtatggattgac
cttgagatgaccggtttggatattgaagttgataaaatattggagattgcttgtgtagtt
acaaatggaaatttgacaaaatcaattgagggtcctgatttggttatacatcaagctaag
ctgtgtctagacaatatgggaacatggtgccaagagcatcatgcagcgagcggtttgact
gagaaggtccttaagagtacagtcaccgaagaagaagctgaaaaactggttattgaattt
gtgaagagaaatattggcacatatacaccattactagcaggaaattcagtctacgtggat
tttcaatttttgaagaaatatatggcgaatctggctagtctattttcacatgtacttgtt
gatgttagcagtgtcaaggcattgtgtcttcgttggtatccaagagatggaaaaaaggca
cctaaaaaggaaaacaagcacagagctatggatgacattaaggagagcatagcagaactc
aaatactacaagggacacatatttaaagcatccaagtccaataagtaa

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