Solanum lycopersicum (tomato): 101260240
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Entry
101260240 CDS
T02665
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101260240
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sly01009
]
101260240
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101260240
03036 Chromosome and associated proteins [BR:
sly03036
]
101260240
Protein phosphatases and associated proteins [BR:
sly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
101260240
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
101260240
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
101260240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ComGF
Motif
Other DBs
NCBI-GeneID:
101260240
NCBI-ProteinID:
XP_004241940
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All DBs
Position
6:complement(39560526..39572457)
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AA seq
512 aa
AA seq
DB search
MNAGDGGASAGTPAPLEWKFSQVFGERTAGEEVQEVDVISAIEFDRTGDHLATGDRGGRV
VLFERTDAKEHAGSQRELERMDYPVARHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIR
WCQMANGALFLLSTNDKTIKFWKVQEKKVKKISDLNIDPSRGVAKGSMPSSSVSSSQKQY
LANGCYTDGSSECLSNDLSFPPGGLPGLRLPVVTSGETSLAARCRRVYAHAHDYHINSIS
TNCDGETFISADDLRINLWNLQISNQSFNIIDVKPTNMEDLTEVITSAEFHPTHCNILAY
SSSRGSIRLVDMRQSALCDSHSKLFEEQETPGSRSFFTEIIASISDIKFAKAGRYILSRD
YMTLKLWDINMDSGPVSTFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGSRVATGSYSN
LFRVFGCAPGSAEATTLEASKNPRRQVQTPSRPSRSLSSSITRVVRRGSESPGADANGNS
FDFTTKLLHLTWHPTENSIACAAANSLYMYYA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctggtgatggcggagcttcggcgggaacaccagctccattggagtggaaattc
tctcaggtatttggtgaacgtacggccggcgaagaagttcaggaagttgatgtcatttca
gctattgagtttgatagaactggcgaccatcttgccaccggggatcgagggggtagggtg
gtgttatttgaaaggaccgatgcgaaggagcatgctggaagccaaagagaattagagaga
atggattatccagtcgctcggcatcccgaattccgttacaaaacagagtttcaaagccat
gagcctgagtttgattatttgaagagtttggagattgaggagaagatcaataagatccgg
tggtgccaaatggctaatggtgccctcttccttttgtctactaatgacaaaactattaag
ttctggaaggtccaagagaagaaagttaagaagatatctgatctgaatatcgacccttcc
agaggtgttgcaaaaggtagcatgcccagttcaagcgtttcttccagtcaaaaacagtat
cttgcaaatgggtgctacacagatggatcttctgaatgtttaagcaatgatttgtcgttt
ccacctggtggtcttcctggattacgcttacctgtggttactagcggtgagaccagcctt
gctgctagatgtagaagagtgtatgcccatgcacatgactatcatatcaattctatttca
actaactgtgatggggaaacatttatatcagctgatgatctccgtataaacctttggaac
ttgcaaataagcaatcaaagtttcaatattattgatgtcaagccaacaaatatggaagat
ctaactgaggtgataacttcagctgaatttcaccctactcactgtaacatattggcttat
agtagttcaagaggatcaatacgtttggtagatatgcggcagtcagcattgtgcgactcg
cactctaagttgtttgaggagcaggaaactcctggctcaaggtccttttttaccgagata
attgcttcaatttcagatataaaatttgcaaaggctggaagatacatactcagtcgtgac
tacatgaccctgaagctatgggatataaacatggattctggtccagtttcaacttttcag
gttcatgaacatttgagaccaaagctgtgtgatttatatgagaatgattccatctttgat
aaattcgagtgttgccttagtggtgatggttctcgagtagcaactggatcttatagcaat
ctttttcgtgtgttcggttgtgctccgggaagcgcagaagcgactacattagaagcgagc
aaaaaccccaggagacaagtccagaccccttcgaggccttccaggtccttgagcagcagt
ataacccgtgttgtcaggagaggatcagaaagtcctggggctgatgccaatggaaactca
tttgatttcacaaccaaactgctccaccttacatggcatccaactgaaaattcaattgca
tgtgctgctgcaaacagcttgtacatgtattatgcataa
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