Streptomyces avermitilis: SAVERM_4258
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Entry
SAVERM_4258 CDS
T00126
Symbol
cydCD
Name
(GenBank) putative ABC transporter ATP-binding protein
KO
K16014
ATP-binding cassette, subfamily C, bacterial CydCD
Organism
sma
Streptomyces avermitilis
Pathway
sma02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAVERM_4258 (cydCD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sma02000
]
SAVERM_4258 (cydCD)
Transporters [BR:
sma02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SAVERM_4258 (cydCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
AAA_21
AAA_29
AAA_22
AAA_5
AAA_16
AAA_33
nSTAND1
MMR_HSR1
ATP-synt_ab
NACHT
AAA_24
AAA_18
nSTAND3
Mg_chelatase
AAA_7
T2SSE
NB-ARC
EhaL
TsaE
DUF87
APS_kinase
PduV-EutP
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAC71970
NITE:
SAV4258
UniProt:
Q82FJ4
LinkDB
All DBs
Position
complement(5220167..5223721)
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AA seq
1184 aa
AA seq
DB search
MKPIDPRLLRYARATRVFLAAVVVLGAVGAVLVIAQAMLIAEIVVGAFQHGHSVAELRTP
LVLLAAVAAGRGLVAWLTELAAHRASAAVKSELRRRLLERAASLGPGWLSGQRTGSLVAL
ATRGIDALDDYFSRYLPQLGLAVVVPVAVLARIVTEDWVSAAIIVGTLPLIPFFMILIGW
ATRTQMDRQWRLLSQLSGHFLDVVAGLPTLKVFGRAKAQAESIRRITGEYRQATMRTLRI
AFLSSFALELLATISVALVAVTIGMRLVHGEMDLYIGLVILVLAPEAYLPLRQVGAQYHA
AAEGLAAAEEIFAVLETPAPVSGSLRAPEGEIAFEDVTVRYPGRSADAVSKVSFTVAAGE
TVALVGPSGVGKSTLLNVLLGFVSPTEGRVRAGGADLASADLEEWRSRIAWVPQRPHVYA
GTIAENVRLARPGADDTEVRRALADAGALEFVDALPEGAETLLGEDGTGLSAGQRQRLAL
ARAFLADRPVLLLDEPTAALDGATEAEVVAAVRRLAVGRTVLLVVHRPALLGVADRVVRC
EPVESAAMELAEPAAAVESAESARAAGAVSGGGDQTSGREAADAVPSAAEDDVRRSPLRH
GRVLSRVRAMAGPRRGRLTFALLLGAAALGSAVGLMATSGWLISRASQQPPVLYLMVAVT
ATRAFGIGRAVFRYAERLVSHDAVLRMLADTRVAVYRRLERLAPAGLRTTRRGDLLSRLV
ADVDALQDYWLRWLLPAGAALVVSAASVGFTAWLLPEAGAALAVGLLAAGVGVPLVTAAV
ARRAERRLAPARGVLATRVTDLLTGTAELTVAGALPARIAGARRADATLTRIASRAAAAT
ALGDGLTALLSGLTVVAAALVGAQAVVDGRLSGVAMAVVVLTPLAAFEAVLGLPPAVQYR
QRVRRSAERVYEVLDAPEPVREPERPRTAPASPFPLVVTGLTARHEGQHRDALAGLDLTL
EKGRRIAVVGPSGSGKTTLAQVMLRFLDAGAGTYTLGGTDAYALDGDDVRRLVGLCAQDA
HLFDSSVRENLLLARRDATEGDLRDALARARLLNWVDGLPDGLDTLIGEHGARLSGGQRQ
RLALARALVADFPVLVLDEPAEHLDLPTADALTADLLAATEGRTTLLITHRLAGLEAVDE
VIVLADGRAVQRGAYAELAAVNGPLREMVGRETEDGLLVGAVAR
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccaatcgacccgcgtctgcttcgatacgctcgcgccacccgcgtcttcctggcg
gcggtcgtcgttctgggtgctgtcggagcggtgctggtcattgctcaggcgatgctcatc
gccgagatcgtggtcggtgccttccagcacggtcactcggtcgctgagctccgcacgccc
cttgtgctgctggcagccgtcgcggccgggcgcggtcttgtcgcgtggctcaccgaactt
gccgcgcatcgggcgagcgcggcggtgaagtcggagctgcggaggcggctgctggagcgg
gcggcctcgctcggaccggggtggctgagcgggcagcgcaccggctcgctcgttgccctg
gccacgcgggggatcgacgccctcgacgactacttctcgcgctatctcccgcagctgggg
ctcgcggtggtcgtacccgtggcggtgctcgcgcggatcgtcaccgaggactgggtgtcg
gcggcgatcatcgtcggcacgctgccgctgatcccgttcttcatgattctgatcggctgg
gccacgcgcacccagatggaccgccagtggcggctgctgtcccagctgtcgggacatttc
ctcgacgtggtcgccggattgccgacactcaaggtgttcggccgtgccaaggcgcaggcc
gagtccatcaggcggatcaccggcgagtaccggcaggcgaccatgcggacgctgcggatc
gcgttcctgtcgtccttcgccctggaactgctcgccacgatctccgtcgcgctggtcgcg
gtgaccatcggcatgcggctcgtccacggcgagatggacctgtacatcggcctggtcatc
cttgtcctggcgcccgaggcgtatctgccgctgcggcaggtgggcgcccagtaccacgcg
gcggcggaggggctcgcggcggcggaggagatcttcgcggtgctggagaccccggcgccg
gtctccggctcactgcgggcaccggagggtgagatcgccttcgaggacgtgaccgtgcgc
taccccgggcggtcggccgacgcggtgtccaaggtgtccttcacggtggcagccggcgag
accgtggcgctcgtagggccgagcggcgtcgggaagtcgacgctgttgaacgtcctgctg
gggttcgtatcgcccaccgaggggcgggtgcgggccgggggagccgatctcgcctcggcg
gacctggaggagtggcgttcgcggatcgcctgggtgccgcagcggccgcacgtgtacgcg
gggaccatcgccgagaacgtgcggctggcccgtcccggcgcggacgacaccgaggtgcgc
cgggcgctcgccgacgccggagccctggaattcgtggacgcgctgcccgagggcgccgag
acgctgctcggcgaggacggcaccgggctctccgccgggcagcgccaacggctcgccctg
gcccgggcgttcctcgcggaccggcccgtgctgctgctcgacgaacccacggcagccctg
gacggggcgaccgaggccgaggtggtggctgcggtgcggcggctggcagtgggacggacg
gtgctgctggtggtgcaccggccggcgctgctcggggtggcggaccgggtggtgcggtgt
gagcccgtcgagtcggcagcgatggagctcgcggagccggccgcggccgtggagtcggcg
gagtccgccagggccgccggtgctgtgtccggcggaggggaccagacgtccggtcgcgag
gcggccgatgccgtgccctcggccgccgaggacgatgtccgccgctctcccctgcggcac
ggacgagtgctttctcgcgtgcgtgccatggccggtccccggcgagggcgcctcacgttc
gccctgctgctcggtgcggccgcactcgggagcgccgtggggctgatggcgacctccggg
tggctgatctcccgggcctcgcagcagccccccgtgctgtatctgatggtcgccgtgacc
gccacgagggcgttcgggatcgggcgggccgtcttccgctacgcggagcggctcgtgtcg
cacgacgcggtgctgcggatgctcgccgacacccgggtcgccgtctaccggcgtctggaa
cggctggcccccgccgggctgcgcacgacccggcggggtgatctgctgtcgcggctggtc
gccgacgtggacgcgcttcaggactactggctgcggtggctgctgcccgccggggccgca
ctggtcgtctccgccgcctcggtcgggttcaccgcctggctgctgcccgaggccggggcc
gcccttgccgtcggcctgctggcggccggggtcggcgtcccgctggtgaccgcggccgtg
gcccgtcgcgcggagcgcaggctggcgcccgcccgaggcgtgctggcgacccgggtgacc
gatctgctgaccgggacggccgagctgacggtggccggcgcgctgcccgcacggatcgcc
ggagcacgccgggccgacgccacgctcacccgtatcgcctcccgtgccgctgccgccacc
gcgctcggcgacgggctcaccgcgctgctgtccggactgaccgtggtggcggccgccctc
gtaggcgcgcaggcggtcgtcgacgggcgcctgagcggggtggccatggccgtcgtcgtc
ctgaccccgctggccgcgttcgaggccgtgctgggactgccgccggccgtgcagtaccgg
cagcgcgtgcgcaggagcgccgagcgcgtgtacgaggtgctggacgcccccgagcccgta
cgggagccggagcggccgcgtacggcgcccgcgtcgccgttcccgctcgtcgtcacgggg
ctgaccgcccgccacgaggggcagcaccgggacgcgctcgccgggctcgacctcacgctc
gaaaagggtcgcaggatcgccgtggtcggcccctccgggtcgggcaagacgacgctcgcg
caggtgatgctgcggttcctggacgcgggtgcggggacgtacacgctgggcggtacggat
gcgtacgccctcgacggcgacgacgtacggcggctcgtcgggctctgtgcccaggacgcg
cacctcttcgacagttccgtgcgcgagaacctgctccttgcccgcagggacgccaccgag
ggggatctgcgcgacgcgctggcgcgggcccggctcctcaactgggtggacgggctgccc
gacgggctcgacacgctgatcggcgagcacggggcacggctgtccggcggccagcgtcag
cggctcgcgctggcccgtgccctggtggccgacttcccggtgctcgtcctcgacgaaccc
gcggaacacctcgacctgccgacggcggacgcgctcacggcggacctgctggccgcgacg
gaggggcgtacgacactgctgatcacccaccggctggccggactggaagcggtcgacgag
gtgatcgtgctggcggacgggcgcgcggtgcaacgcggggcctacgcggagctggcagcc
gtgaacgggccgctgcgggagatggtgggccgggagaccgaggacgggttgctggtgggg
gcggtggcccgctag
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