Streptomyces avermitilis: SAVERM_614
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Entry
SAVERM_614 CDS
T00126
Symbol
sig5
Name
(GenBank) putative RNA polymerase ECF-subfamily sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sma
Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sma03021
]
SAVERM_614 (sig5)
Transcription machinery [BR:
sma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAVERM_614 (sig5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BAC68324
NITE:
SAV0614
UniProt:
Q82QA6
LinkDB
All DBs
Position
complement(767899..768552)
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AA seq
217 aa
AA seq
DB search
MITPVLPVSREKRDAGRKAADQPGAMAWPDDAATAWALAARAGDPDAVDRFVRALHPDVV
RYITHLSSDRQLADDLAQDTFLRALGSLHRFEGRSSARTWLLSIARRTVIDNVRYTAARP
RLRDTDDWTVWAERAQPSGLPGFEDGVALLDLLDALPAERREAFVLTQLTGLPYEEAAEA
SGCPVGTIRSRVARARATLVALLVEAEESRAPAAVAA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgatcactcctgtcctccccgtgtcgcgcgagaagcgcgacgcggggcgcaaggcggcg
gatcagcccggcgccatggcatggcccgacgatgcggccaccgcctgggccctcgccgcc
cgcgccggcgaccccgacgccgtcgaccgcttcgtgcgtgccctgcaccccgacgtcgtc
cgctacatcacgcacctctcctccgaccgtcagctcgccgacgacctggcgcaggacacg
ttcctgcgggcactcggcagcctgcaccggttcgaggggcgctcgtcggcgcgtacgtgg
ctgctgtccatcgcgcgccgcacggtgatcgacaacgtgcgctacaccgcggcccggccg
cggctgcgtgacacggacgactggacggtatgggccgagcgggcccagccgagcggtctg
cccggcttcgaggacggtgtggccttgctcgatctgctggacgcgctgcctgctgagcgc
cgtgaggcgttcgtcctcacccagctgacgggactgccctacgaggaggctgccgaggcc
agcggttgtcccgtcggcacgatccgctcgcgggtggcacgagcccgggcgaccctcgtc
gcacttcttgtcgaggccgaggagtcgcgggcccccgccgccgtcgccgcgtga
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