Serratia marcescens subsp. marcescens Db11: SMDB11_0142
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Entry
SMDB11_0142 CDS
T03985
Symbol
rpoS
Name
(GenBank) RNA polymerase, sigma S (sigma 38) factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smac03021
]
SMDB11_0142 (rpoS)
Transcription machinery [BR:
smac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SMDB11_0142 (rpoS)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
CDG10737
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Position
163325..164323
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AA seq
332 aa
AA seq
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MSQNTLKVNELHDDADFDENGAEAESFDEKALVEEETSENDLAEEELLSQGVTQRVLDAT
QLYLGEIGYSPLLTAEEEVYFARRALRGDVPSRRRMIESNLRLVVKIARRYSNRGLALLD
LIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVY
LRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDIL
ADEKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLT
RERVRQIQVEGLRRLREILQMQGLSIEALFRE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaatacgctgaaagttaacgagttacatgatgatgcggatttcgacgagaat
ggagctgaggccgagtcgtttgatgaaaaagcgctggtagaagaagagaccagcgagaac
gatttagcggaagaagagctgttgtctcaaggcgttacgcaacgcgtattggatgcgacg
cagctctatctgggtgagatcggttattcacctctgctgaccgcagaggaagaagtctat
tttgcacggcgtgctctgcgcggtgatgtgccgtcccgccgtcgcatgattgaaagcaac
ctgcggctggtggtgaaaatcgcccgccgctacagcaaccgcggtctggcgctgctggat
ctgatcgaagaaggtaacctcggtttgattcgcgcagtggaaaaattcgacccggaacgc
ggtttccgcttctccacttatgcaacctggtggatccgtcagacgattgaacgggcgatc
atgaaccaaacccgtactattcgtttgcctatccatatcgtcaaagaactgaatgtctat
ctgcgcaccgcacgcgagctttcccataagctggatcatgaaccgagcgctgaagagatt
gccgagcaactcgacaagccggtggatgacgtcagccgcatgctgcgcctgaatgagcgc
atcacttcggtggatacgccgctgggcggggattcggagaaagcgctgctggacattctg
gccgacgagaaggacaacgggcctgaagacaccacgcaagatgacgatatgaaacaaagc
atcgtcaaatggttgttcgaactgaacgccaaacaacgtgaagtgttggcgcgtcgtttc
ggcctgctgggctatgaagcggcgacgctggaagacgtaggtcgggagattggcctgacg
cgcgagcgcgtccgtcagattcaggttgaaggtctgcgccgtctgcgtgagattctgcag
atgcagggcctgagcattgaggcgctgttccgcgaataa
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