Serratia marcescens subsp. marcescens Db11: SMDB11_0941
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Entry
SMDB11_0941 CDS
T03985
Symbol
rumB
Name
(GenBank) 23S rRNA m(5)U747 methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smac03009
]
SMDB11_0941 (rumB)
Enzymes [BR:
smac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
SMDB11_0941 (rumB)
Ribosome biogenesis [BR:
smac03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SMDB11_0941 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_12
Methyltransf_15
Methyltransf_11
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
CDG11518
LinkDB
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Position
985014..986144
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AA seq
376 aa
AA seq
DB search
MHCALYTAGTCRSCQWLEKPYPQQLADKQHHLQSLLAGRDVAQWLQPAAGELSAFRNKAK
MVVSGSVERPLLGMLHRDGTPVDLSDCPLYPAGFAPMFAVLKSFIARAGLTPYNVARKRG
ELKYLLLTESTLDGGVMLRFVLRSETKLAQLRAALPWLQQQLPQLKVISANIQPVHMAIM
EGEREIALTEQQALEEQFNQVPLFIRPQSFFQTNPQVAADLYATARDWVRALGIDSMWDL
FCGVGGFGLHCAQPQTRLTGIEISAEAIACARQSAQRLGLLHVDFQALDSTRFATAEGQV
PQLVLVNPPRRGIGQALCDYLSRMAPDYILYSSCNAESMAKDIETLPGYRIERVQLFDMF
PHTAHYEVLTLLVRRL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgctttgtatacggcgggcacctgccgttcctgtcagtggctggaaaagccc
tatccgcagcaactggccgacaaacagcatcacctgcaatcgctgctggctgggcgcgac
gtcgcgcagtggctgcagccggcggcgggggaactgagcgcatttcgcaataaagccaag
atggtggtcagcggcagcgtggagcgcccgctgctcggcatgctgcaccgcgacggcacg
ccggtcgatctgagcgactgcccgctgtatcccgccggctttgcgccgatgtttgcggtg
ctgaaaagcttcatcgcccgcgccggcctgacgccgtataacgtggcgcgcaaacgcggc
gagttgaaatacctgctgctgaccgaaagcacgctcgacggcggcgtgatgctgcgtttc
gtgctgcgctcggaaaccaagctggcgcagctgcgcgctgcgctgccgtggctgcagcag
cagctgccgcagctcaaggtgatctccgccaatattcagccggtgcacatggcgatcatg
gaaggggagcgcgagatcgcgctgaccgaacagcaggcgctcgaggaacagttcaatcag
gtgccgttgttcatccgcccgcaaagcttcttccaaaccaacccgcaggtggccgccgat
ctgtacgccaccgcccgcgactgggtgcgcgcgctgggtatcgacagcatgtgggatctg
ttctgcggcgtcggcggtttcggcctgcactgtgcgcagccgcaaacgcggctgaccggc
atcgaaatcagcgcggaagcgatcgcctgcgcgcgccagtcggcgcagcggttagggttg
ttgcacgtagattttcaggcgctcgactccacccgcttcgccaccgccgaaggccaggtg
ccacagctggtgctggttaacccgccgcggcgcggcattggccaggcgctgtgcgactac
ctgagccggatggcgccggactatattctctattccagctgcaacgccgagagcatggcg
aaagatatcgagacgttgccggggtaccgcatcgaacgggtgcagctgttcgacatgttc
ccgcataccgcgcactacgaagtgttgacgctgctggtgcggcgtttataa
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