Serratia marcescens subsp. marcescens Db11: SMDB11_1090
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Entry
SMDB11_1090 CDS
T03985
Name
(GenBank) putative proline racemase
KO
K12658
4-hydroxyproline epimerase [EC:
5.1.1.8
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00470
D-Amino acid metabolism
smac01100
Metabolic pathways
Module
smac_M00948
Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SMDB11_1090
Enzymes [BR:
smac01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.8 4-hydroxyproline epimerase
SMDB11_1090
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GFIT
Motif
Pfam:
Pro_racemase
PhzC-PhzF
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
CDG11664
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Position
1155270..1156217
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AA seq
315 aa
AA seq
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MALSAHITALRAIDSHTGGEPTRLIVEGFPDLGEGSMAERRARFAQHYDDWRCAVMLEPR
GNDVLVGALLCRPCSPQATAGVIFFNNNGYLGMCGHGTIGLIASLAHLGRIHAGCHLIET
PVGTVNATLHDDGSVTVENVAAYRYRRQVRLEVGGYGPVTGDIAWGGNWFFLIGESPLPI
DRQNLEALTAFTWAVRQTLEQAGICGEDGGVIDHIELFGDDPQADSRSFVLCPGKAYDRS
PCGTGTSAKLACLAADGKLPPETQWRQVSVIGSEFQAYYRWNGERITPFIRGQAYVCADS
QLLLDERDPFVWGIR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcactttctgcgcatatcaccgctttgcgggcgatcgattctcataccggcggagag
ccgacacgtctgatcgtggaagggtttcccgatctcggcgagggcagcatggcggaacgg
cgggcgcgtttcgcgcaacattatgacgattggcgctgcgcggtgatgctcgaaccgcgc
ggcaatgacgtactggtgggggcgctgctgtgtcgcccctgctcgccgcaggccaccgct
ggggtgatcttctttaacaacaacggctatctgggtatgtgcgggcacggcactatcggg
ctgatcgcttcgctggcgcacctggggcgcatccacgccgggtgccatctcatcgagacc
ccggtcggcacggtaaacgccacgctgcatgacgacggcagcgtcacggtggagaacgtg
gcggcttatcgttaccgtcgccaggtgcggcttgaggttgggggatacgggccggtgacg
ggggatatcgcctggggcggtaactggttcttcctgatcggcgagtcgccgttacctatc
gatagacaaaatctggaggcattgaccgcgttcacctgggcggtgcggcagacattggaa
caggcgggcatctgcggtgaagacggcggagtgatagaccatatcgaactgttcggtgac
gatccgcaggccgacagccgaagcttcgtgttgtgccccggcaaagcctatgatcgttct
ccgtgcggtaccggtaccagcgccaaactggcgtgtctggcggcggacggcaaactgcca
ccggaaacgcagtggcggcaggtcagcgtgatcggtagcgaattccaggcctattaccgc
tggaatggcgaacgtattactccttttattcgcgggcaggcctatgtgtgtgccgatagc
caactgctgctcgacgaacgcgatccctttgtctggggaatacgctga
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