Serratia marcescens subsp. marcescens Db11: SMDB11_3196
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Entry
SMDB11_3196 CDS
T03985
Symbol
gcvA
Name
(GenBank) glycine cleavage system regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smac03000
]
SMDB11_3196 (gcvA)
Transcription factors [BR:
smac03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SMDB11_3196 (gcvA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
CDG13760
LinkDB
All DBs
Position
complement(3383264..3384181)
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AA seq
305 aa
AA seq
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MSKRLPPLNALRVFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYYLDIKEIFSSINEATRKLQARSAKGALTVSLPPSFAIQWLVPRLSGFNSAY
PGIDVRIQAVDREEDKLADDVDVAIFYGRGNWPGLRAERLYAEYLLPVCSPSLLTGDHPL
KTAEDLAYHTLLHDVSRRDWLAYTRQLGLQHINVQQGPIFSHSAMVVQAAVHGQGVALVN
NVMAQTEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILARAASEQEKFR
FRYEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgcttacctcccctcaatgcgctgcgcgtgttcgatgcggccgctcgccac
ctgagtttcaccaaggcggcggaagagttgttcgtgacccaggccgcggtgagccaccag
atcaagtcgctggaggacttcctcggactgaagctgtttcgccggcgcaatcgctcgctg
ctgctgaccgaagagggccaaagttactacctcgatatcaaggagattttctcttcgatc
aacgaggcgacgcgcaagctgcaggcgcgtagcgccaagggggcattgaccgtcagtctg
ccgccgagcttcgccattcagtggctggtgccacggctgtccggctttaactcagcttat
ccgggcatcgacgtgcgcatccaggcggtggaccgcgaagaggacaagctggcggacgac
gtcgacgtggcgattttctacggccgcggcaactggccggggctgcgcgccgagcgcctg
tatgcggaatatttgctgccggtgtgttcgccgagcctgctgaccggcgatcatccgctg
aaaaccgcagaggatctggcttatcatacgttgctgcatgacgtttcacgccgcgactgg
ctggcttatacgcgccaactggggttgcagcacatcaacgtgcagcaggggccgatcttc
agccacagcgccatggtggtgcaggcggcggtgcacggtcagggcgtggcgctggtgaac
aacgtgatggcgcaaaccgagattgaagccggtcgcctggtgtgcccgttcaacgatgtg
ctggtcagtaaaaacgctttttatctggtatgtcatgacagccaggcagaactgggtaaa
atagccgccttccggcagtggatcctggcgcgtgccgccagcgaacaagagaagttccgc
ttccgctacgaacaataa
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