Serratia marcescens subsp. marcescens Db11: SMDB11_3348
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Entry
SMDB11_3348 CDS
T03985
Name
(GenBank) LysR-family transcriptional regulator
KO
K16135
LysR family transcriptional regulator, transcriptional activator for dmlA
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smac03000
]
SMDB11_3348
Transcription factors [BR:
smac03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SMDB11_3348
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_AsnC-type
HTH_11
Motif
Other DBs
NCBI-ProteinID:
CDG13911
LinkDB
All DBs
Position
complement(3548311..3549270)
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AA seq
319 aa
AA seq
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MKHKTRIMNNMPILSDLRVFVLVARRAGFAAAAEELGVSPAFISKRIALLEKALDVSLLH
RTTRRVAITEDGERIYEWAQRILNDVDQMMDELSEVRQAPQGMLRVVSSFGFGRRFVAPA
LSALARQYPQLELRLDVSDRLVDLVSEGFDLDIRIGDDIAPNLIARKLADNQRILCASPA
YLQRHGVPKNPAELAGRTCLVIKERDHPFGLWRLQGPGGEETVKVTGALASNHGEIVHQW
CLDGQGVALRSAWDVKENIDSGRLVHILPEYYQPANIWAVYVSRLATSAKVRVTVEFLRD
YFREHYGETGPASENSSRS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacataaaacacgaatcatgaacaatatgccgatcctgagtgacctgcgggtgttc
gtgctggtggcgcgccgcgccgggtttgccgccgccgccgaagagctgggcgtgtcgccg
gcctttatcagcaaacgcattgcgttgctggaaaaagcgctggacgtgtcgttgctgcac
cgcaccacgcggcgagtggcgatcaccgaagacggcgaacgcatctacgaatgggcgcag
cgcattctcaacgacgtcgatcagatgatggacgagctgtccgaggtgcgtcaggcgccg
cagggcatgctgcgcgtggtcagcagcttcggcttcggccggcgtttcgtggcgccggcg
ctgtcggcgctggcgcggcagtacccgcagctggagctgcggctcgacgtgtccgatagg
ctggtggatctggtcagcgaagggttcgatctggatatccgcatcggcgacgatatcgcc
cccaatttgattgcgcgcaagctggcggacaatcagcgcatcttgtgcgcttcgccggcg
tacctgcagcgccacggcgtgccgaaaaacccggcggagctggcgggccgcacctgtttg
gtgatcaaggaacgcgatcacccgttcgggctgtggcggctgcaggggccgggcggcgaa
gagacggtgaaggtgacgggggcgctggcgtcgaaccacggcgagatcgtgcaccagtgg
tgcctggacgggcagggcgttgcgctgcgttccgcctgggacgtaaaagagaacatcgac
agcggcagattggtgcacatcctgccggagtattatcagccggccaacatctgggcggtg
tacgtttcccggctggcaacgtcggcgaaagtgcgggtgacggtcgaatttttgcgcgac
tattttcgtgagcactacggcgaaacggggccggcgagcgaaaattcgtcgcggtcttga
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