Serratia sp. FGI94: D781_0004
Help
Entry
D781_0004 CDS
T02433
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
smaf
Serratia sp. FGI94
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smaf03032
]
D781_0004
03400 DNA repair and recombination proteins [BR:
smaf03400
]
D781_0004
Enzymes [BR:
smaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
D781_0004
DNA replication proteins [BR:
smaf03032
]
Prokaryotic type
DNA Topoisomerases
D781_0004
DNA repair and recombination proteins [BR:
smaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D781_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
HATPase_c
GyrB_hook
Toprim
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AGB80408
UniProt:
L0M934
LinkDB
All DBs
Position
4281..6695
Genome browser
AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCSDIQ
VTIHADNSVSVQDDGRGIPTGIHPEEGVSAAQVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELVIRRDGQVHEQTYSHGEPQAPLTVVGETEQTGTTVRFWPSHQTFTNVV
EFEYDILAKRLRELSFLNSGVSIRLKDKRSDKEDHFHYEGGIKAFVEYLNKNKTPIHPNV
FYFSTMKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSEY
LLENPGDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRRNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVFIAQPPLYKVKKG
KQEQYIKDDDAMDQYQIAIALDGATLHTNPDAPALSGEALEKLVSEHNSVQKLIARMERR
YPRALLNNLIYQPTLAEEDLGDRAKVQSWIESLASLLNDNEQHGSSYSFEIYENRERQLF
EPALRIRTHGVDTDYLLDFDFIHGGEYRKICQLGEKLRGLIEEGAFIERGERRQPVDSFE
KALEWLVKESRRGLAVQRYKGLGEMNAEQLWETTMDPENRRMLRVSVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctcaagtatcaaggtattaaaagggctggatgcggtgcgt
aagcgcccgggcatgtatatcggcgataccgatgacggcaccggtctgcaccacatggta
ttcgaggttgtggacaacgctatcgacgaagcactcgctggccactgtagtgatattcag
gtcaccatccatgccgacaactccgtgtcggtgcaggatgacggccgtggcattccaacc
gggatccacccggaggaaggcgtttccgccgcgcaggtcatcatgaccgtactgcacgcc
ggcggtaagttcgacgataactcttacaaggtttccggcggcctgcacggcgtgggcgtc
tcggtggttaacgcactgtccgagaagctggaactggtgatccgccgcgacggccaggtg
cacgagcaaacctacagccacggcgagccgcaggcgccgctgaccgtggtcggcgagacc
gaacagaccggcaccacggtgcgtttctggccgagccatcagaccttcaccaacgtggtg
gagttcgaatacgacatcctggcgaaacgcctgcgcgaactgtcgttcctcaactccggc
gtgtccatccgtctgaaagacaagcgcagcgacaaagaggaccacttccactacgaaggc
ggcatcaaggcgtttgtcgaatatctgaacaagaacaaaaccccgatccacccgaacgtg
ttctatttctccaccatgaaggacgacatcggggtggaagtggcgctgcagtggaacgac
ggtttccaggaaaatatctactgcttcaccaacaacattccgcagcgcgacggcggcacc
cacctggcgggcttccgcgcggcgatgacccgtacgctgaacgcctatatggacaaagaa
ggctacagcaagaaggcgaaggtcagcgctaccggcgacgatgcgcgtgaaggcctgatc
gccgtggtgtcggtgaaagtgccggatccgaagttctcctcgcagaccaaagacaagctg
gtctcctccgaggtgaaatcggcggtggaacagcagatgaacgaactgctgagcgaatac
ctgctggaaaacccgggcgatgcgaaaatcgtcgtgggtaaaatcatcgacgcggcgcgc
gcgcgtgaagcggcgcgtaaagcgcgtgagatgacacgccgtaaaggggcgctggatctg
gccggcctgccgggcaagctggcggactgccaggaacgcgacccggcgctgtccgaactg
tacctggtggaaggggactccgcgggcggctctgccaagcaggggcgcaaccgcagaaac
caggcgattctgccgctgaagggtaaaatcctcaacgtggagaaagcgcgcttcgacaag
atgctctcttcgcaggaagttgccaccctgatcaccgcgctgggttgcggcatcggccgc
gatgagtacaacccggacaagctgcgttaccacagcatcatcatcatgaccgatgctgac
gtcgacggctcgcacatccgtacgctgctgttgaccttcttctaccgtcagatgccggaa
atcattgagcgcggtcacgtgttcattgcccagccgccgctgtacaaggtgaagaaaggc
aagcaggaacagtacattaaagacgatgacgcgatggaccagtaccagatcgccatcgcg
ctggacggcgccaccctgcacaccaacccagatgcgccggcgctgtcgggtgaagcgctg
gaaaaactggtgtctgagcacaacagcgtgcagaagctgattgcccgtatggagcgccgc
tacccgcgcgcgctgctgaacaacctgatctatcagccgacgctggcggaagaggatctc
ggcgaccgcgcgaaagtgcagagctggatcgaatcgctggccagcctgctgaacgacaat
gagcagcacggcagcagctacagctttgaaatctatgaaaaccgtgaacgccagctgttc
gaaccggcgctgcgtatccgcacccacggcgtggataccgactacctgctggactttgac
tttattcacggcggcgaataccgcaagatttgccaactgggcgagaagctgcgcggcctg
attgaagaaggcgcgtttatcgaacgcggcgaacgtcgtcagccggtcgacagcttcgaa
aaagcgctggagtggctggtgaaagagtcgcgtcgcggcctggcggtccagcgttataaa
ggtcttggcgagatgaacgccgagcagctgtgggaaaccaccatggatccggaaaaccgc
cgcatgctgcgcgtcagcgtcaaggatgcgattgcggcggaccagctgttcaccaccctg
atgggcgatgcggttgaacctcgtcgcgcctttatcgaagaaaacgccctgaaagcggcg
aacatcgatatctaa
DBGET
integrated database retrieval system
